RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SLX4IPQ5VYV7 408 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ZER1Q7Z7L7 766 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 RBM45Q8IUH3 476 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 THAP7Q9BT49 309 aaPredicted RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 OR10A4Q9H209 315 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 NTN4Q9HB63 628 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 TRBV4-1A0A0J9YWV2 114 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 CSN2P05814 226 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SOX2P48431 317 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC26A5P58743 744 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC23A3Q6PIS1 610 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 RIMKLAQ8IXN7 391 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ACBD7Q8N6N7 88 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SDR9C7Q8NEX9 313 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 OR5M1Q8NGP8 315 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 S100A16Q96FQ6 103 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 NIPAL2Q9H841 368 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 TMEM14AQ9Y6G1 99 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SLCO1B1Q9Y6L6 691 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A0X1KG70 313 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SYT5O00445 386 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 ARSBP15848 533 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 POLR2HP52434 150 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 RAE1P78406 368 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 MRPL49Q13405 166 aaKnown RBP9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 SMCO1Q147U7 214 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 C9orf135Q5VTT2 229 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 CREB3L2Q70SY1 520 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 TMEM17Q86X19 198 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 DEFB127Q9H1M4 99 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 UCK1Q9HA47 277 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A1B0GVI7 797 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF432O94892 652 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 FTH1P19P0C7X4 201 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF91Q05481 1191 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 COL28A1Q2UY09 1125 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 CCDC107Q8WV48 283 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 UCN3Q969E3 161 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 YIPF6Q96EC8 236 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 SGCZQ96LD1 299 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 GALNT9Q9HCQ5 603 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 LUZP4Q9P127 313 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OSGIN1Q9UJX0 560 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 FAM183AA6NL82 134 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 K7ESF4 209 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 CREBL2O60519 120 aaPredicted RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 PITPNBP48739 271 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 TSC22D1Q15714 1073 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ARHGAP11BQ3KRB8 267 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 NDUFAF7Q7L592 441 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 TMEM179BQ7Z7N9 219 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OR4N2Q8NGD1 307 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ZMYND19Q96E35 227 aaPredicted RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 SLIRPQ9GZT3 109 aaKnown RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF768Q9H5H4 540 aaKnown RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 PLA2G3Q9NZ20 509 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 EDARQ9UNE0 448 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 CACNG2Q9Y698 323 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 S1PR1P21453 382 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 CFL1P23528 166 aaKnown RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 CHMP24386 653 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 PEBP1P30086 187 aaKnown RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 EIF1P41567 113 aaKnown RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 MLLT11Q13015 90 aaPredicted RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 LRRC37A5PQ49AS3 106 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OR2G6Q5TZ20 316 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OGFOD3Q6PK18 319 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 C16orf47Q6ZP98 133 aaPredicted RBP9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OR4C15Q8NGM1 316 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OR13C2Q8NGS9 318 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 OR8K3Q8NH51 312 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 PIGQQ9BRB3 760 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 SAP130Q9H0E3 1048 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 KLHL21Q9UJP4 597 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 ZNF337Q9Y3M9 751 aa9.77□□□□□ -0.85
CARMIL3-202ENST00000559694 SPTAN1Q13813 2472 aaKnown RBP9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 ARPC5O15511 151 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 ICOSLGO75144 302 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 MRPL33O75394 65 aaKnown RBP9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 ALDOBP05062 364 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 GYPBP06028 91 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 ACP2P11117 423 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 CSNK1A1P48729 337 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 CARD18P57730 90 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 TAGLNQ01995 201 aaKnown RBP9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 SLC14A1Q13336 389 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 JAGN1Q8N5M9 183 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 FCAMRQ8WWV6 532 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 TNFRSF13CQ96RJ3 184 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 FBXL4Q9UKA2 621 aa9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 NDRG4Q9ULP0 352 aaKnown RBP9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 KLF13Q9Y2Y9 288 aaPredicted RBP9.76□□□□□ -0.85
CARMIL3-202ENST00000559694 PCDHGA6Q9Y5G7 932 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms