RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 KCNS3Q9BQ31 491 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 TMEM43Q9BTV4 400 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 SLC17A5Q9NRA2 495 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 FAIMQ9NVQ4 179 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 CISD1Q9NZ45 108 aaKnown RBP7.19□□□□□ -1.26
SNX1-207ENST00000559401 MGAT4BQ9UQ53 548 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 RCE1Q9Y256 329 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 SLC25A15Q9Y619 301 aa7.19□□□□□ -1.26
SNX1-207ENST00000559401 ROS1P08922 2347 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 A0A096LPE4 126 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 A0A1W2PPZ6 126 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ZNF726A6NNF4 738 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 M0R3G1 203 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TRAF3IP2O43734 574 aaPredicted RBP7.18□□□□□ -1.26
SNX1-207ENST00000559401 SEC14L2O76054 403 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ZNF682O95780 498 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CH25HO95992 272 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 HPRP00739 348 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 MT-ATP6P00846 226 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 HIST1H2ABP04908 130 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ADORA3P0DMS8 318 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CD40P25942 277 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 IFNA8P32881 189 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 KDELR2P33947 212 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CDKN1AP38936 164 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CAPZA2P47755 286 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR1E2P47887 323 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 SLC7A2P52569 658 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CRYBA2P53672 197 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 GYS2P54840 703 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ATP5J2P56134 94 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 GNGT1P63211 74 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TUBA1BP68363 451 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TUBA4AP68366 448 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 LIPEQ05469 1076 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 LTBQ06643 244 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CAMK2DQ13557 499 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CEACAM16Q2WEN9 425 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TBRG1Q3YBR2 411 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 WDR88Q6ZMY6 472 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TUBA1AQ71U36 451 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 HIST3H2AQ7L7L0 130 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 NANOGNBQ7Z5D8 188 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TREML1Q86YW5 311 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 SCAIQ8N9R8 606 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 WDR31Q8NA23 367 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ADPRHL1Q8NDY3 354 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR1K1Q8NGR3 316 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR6N1Q8NGY5 312 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR5J2Q8NH18 312 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR6S1Q8NH40 331 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 LILRB1Q8NHL6 650 aaPredicted RBP7.18□□□□□ -1.26
SNX1-207ENST00000559401 LZICQ8WZA0 190 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 HIST1H2ACQ93077 130 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 TRMT61AQ96FX7 289 aaKnown RBP7.18□□□□□ -1.26
SNX1-207ENST00000559401 SLC41A3Q96GZ6 507 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 MPP4Q96JB8 637 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 Q96MF0 132 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 OR2M2Q96R28 347 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 EMC6Q9BV81 110 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 LINC00470Q9BZP3 86 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 AMBRA1Q9C0C7 1298 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 FKRPQ9H9S5 495 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 EFCAB1Q9HAE3 211 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 B3GAT2Q9NPZ5 323 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 NANSQ9NR45 359 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 MED29Q9NX70 200 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 CMTM6Q9NX76 183 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 MRPL39Q9NYK5 338 aaKnown RBP7.18□□□□□ -1.26
SNX1-207ENST00000559401 GMPR2Q9P2T1 348 aaKnown RBP7.18□□□□□ -1.26
SNX1-207ENST00000559401 B3GAT1Q9P2W7 334 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 AP3M1Q9Y2T2 418 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 NOX1Q9Y5S8 564 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 ATP23Q9Y6H3 246 aa7.18□□□□□ -1.26
SNX1-207ENST00000559401 SLC35F4A4IF30 521 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 SHISA9B4DS77 424 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 MS4A18H0YCH9 400 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 CXCR6O00574 342 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 NME4O00746 187 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 PLPP3O14495 311 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 SMAD7O15105 426 aaKnown RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 RNF13O43567 381 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 ZNF432O94892 652 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 OR5F1O95221 314 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 THY1P04216 161 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 SOD3P08294 240 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 HLA-DOBP13765 273 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 LSP1P33241 339 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 SH3BGRP55822 239 aaPredicted RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 ARF1P84077 181 aaKnown RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 PIN1Q13526 163 aaPredicted RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 ZNF74Q16587 644 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 MS4A18Q3C1V0 323 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 ANKRD16Q6P6B7 361 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 LINGO2Q7L985 606 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 TSPYL5Q86VY4 417 aaPredicted RBP7.17□□□□□ -1.26
SNX1-207ENST00000559401 SLC15A3Q8IY34 581 aa7.17□□□□□ -1.26
SNX1-207ENST00000559401 FBXL14Q8N1E6 418 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms