RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 OR1E2P47887 323 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 SELENOPP49908 381 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 GZMMP51124 257 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 P2RY4P51582 365 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 GYS2P54840 703 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 SH3BGRP55822 239 aaPredicted RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 CLDN17P56750 224 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 PSME3P61289 254 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 MXRA7P84157 204 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 ROR2Q01974 943 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 POU3F1Q03052 451 aaPredicted RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 LIPEQ05469 1076 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 PIN1Q13526 163 aaPredicted RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 KRT72Q14CN4 511 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 TSC22D1Q15714 1073 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 GABRA6Q16445 453 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CYBRD1Q53TN4 286 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 NCMAPQ5T1S8 102 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 TSPO2Q5TGU0 170 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 C9orf135Q5VTT2 229 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 SHEQ5VZ18 495 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 SLC22A25Q6T423 547 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 C16orf89Q6UX73 402 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 C22orf34Q6ZV56 151 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 HDDC2Q7Z4H3 204 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 COMTD1Q86VU5 262 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CYP4Z1Q86W10 505 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CARM1Q86X55 608 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 EPHX4Q8IUS5 362 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 LURAP1LQ8IV03 231 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CCDC36Q8IYA8 594 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CDK20Q8IZL9 346 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 KDM8Q8N371 416 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 ADPRHL1Q8NDY3 354 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 OR5J2Q8NH18 312 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 OR52N5Q8NH56 324 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 TMEM171Q8WVE6 324 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 GEMIN6Q8WXD5 167 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 AKAP1Q92667 903 aaKnown RBP eCLIP3.85□□□□□ -1.79
SNX1-205ENST00000559339 GTPBP3Q969Y2 492 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 FAM162AQ96A26 154 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 TRMT61AQ96FX7 289 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 LRR1Q96L50 414 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 ADAD1Q96M93 576 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 ALKBH3Q96Q83 286 aaPredicted RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 PIP5K1AQ99755 562 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 FNDC11Q9BVV2 318 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 LINC00470Q9BZP3 86 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 NDEL1Q9GZM8 345 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 MYLK2Q9H1R3 596 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 LIME1Q9H400 295 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 FKRPQ9H9S5 495 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 CRLF2Q9HC73 371 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 KRCC1Q9NPI7 259 aaPredicted RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 MRPL39Q9NYK5 338 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 PLA2G2EQ9NZK7 142 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 STX18Q9P2W9 335 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 TAGLN3Q9UI15 199 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 ZNF229Q9UJW7 825 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 RPS6KA6Q9UK32 745 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 SAMD4AQ9UPU9 718 aaKnown RBP3.85□□□□□ -1.79
SNX1-205ENST00000559339 AMDHD2Q9Y303 409 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 MED31Q9Y3C7 131 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 AKAP6Q13023 2319 aa3.85□□□□□ -1.79
SNX1-205ENST00000559339 ANKRD17O75179 2603 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 IGKV1D-42A0A075B6H8 117 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 A0A096LPE4 126 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 A0A1W2PPZ6 126 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 A0A1W2PR80 420 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 A0A1W2PRG6 482 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SLC35F4A4IF30 521 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 VSTM5A8MXK1 200 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF99A8MXY4 864 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 C11orf98E9PRG8 122 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 RPL36A-HNRNPH2H7BZ11 118 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 M0R1B8 84 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 M0R3G1 203 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 PDLIM1O00151 329 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 NME4O00746 187 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 PLPP3O14495 311 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SIAH2O43255 324 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SHOX2O60902 331 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 FZD7O75084 574 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 UPK3AO75631 287 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 STAMBPO95630 424 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 FAM107AO95990 144 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 BCL10O95999 233 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SERPINA1P01009 418 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 IGF2P01344 180 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CRYAAP02489 173 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ITGA5P08648 1049 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SAGP10523 405 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 CD99P14209 185 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ITGA2P17301 1181 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 TCN1P20061 433 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 PTNP21246 168 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 EDNRAP25101 427 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms