RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 S100A9P06702 114 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CT62P0C5K7 136 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CALM1P0DP23 149 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CALM2P0DP24 149 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CALM3P0DP25 149 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 FOLR2P14207 255 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 GATA1P15976 413 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 TCN1P20061 433 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 NPR2P20594 1047 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 AQP1P29972 269 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CASQ1P31415 396 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 FMO3P31513 532 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 MDH2P40926 338 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 NAA10P41227 235 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SLC1A2P43004 574 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SLC1A1P43005 524 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 NAMPTP43490 491 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 VDAC2P45880 294 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 RPS5P46782 204 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 OR1G1P47890 313 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 TMED10P49755 219 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 KLK7P49862 253 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 RAB9AP51151 201 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CCNHP51946 323 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CARD18P57730 90 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 EIF3EP60228 445 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CSNK1G2P78368 415 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 PDIA2Q13087 525 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ILKQ13418 452 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ISXQ2M1V0 245 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 MRGPRG-AS1Q2M3A8 158 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 HIKESHIQ53FT3 197 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 HSP90AA4PQ58FG1 418 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 OR2B11Q5JQS5 317 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SOHLH1Q5JUK2 328 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ATAD3CQ5T2N8 411 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 OLFML2AQ68BL7 652 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 C22orf42Q6IC83 251 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 REEP3Q6NUK4 255 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CNIH2Q6PI25 160 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CXCL17Q6UXB2 119 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 TMIGD1Q6UXZ0 262 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 Q6ZTC4 211 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 HSD17B13Q7Z5P4 300 aaPredicted RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 VTCN1Q7Z7D3 282 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 TMEM179BQ7Z7N9 219 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 APOBEC3FQ8IUX4 373 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 MMAAQ8IVH4 418 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CMTM1Q8IZ96 169 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 RDH10Q8IZV5 341 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 FBXL16Q8N461 479 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 OR9G1Q8NH87 305 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 RHEBL1Q8TAI7 183 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF502Q8TBZ5 544 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SETD7Q8WTS6 366 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 GTSF1Q8WW33 167 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 NRGNQ92686 78 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SMARCD2Q92925 531 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 SIGLEC12Q96PQ1 595 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 TSG101Q99816 390 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 EBF4Q9BQW3 602 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 KRTAP1-5Q9BYS1 174 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 KRTAP2-2Q9BYT5 123 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 Q9H3A6 140 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ELOVL6Q9H5J4 265 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 UGT1A10Q9HAW8 530 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CYP3A43Q9HB55 503 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 AHSPQ9NZD4 102 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CD274Q9NZQ7 290 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 APOBEC3BQ9UH17 382 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 DCDC2Q9UHG0 476 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 ASF1AQ9Y294 204 aa1.77□□□□□ -2.13
GABPB1-209ENST00000559100 CHTOPQ9Y3Y2 248 aaKnown RBP1.77□□□□□ -2.13
GABPB1-209ENST00000559100 IGHV1OR15-1A0A075B7D0 117 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 IGHV3OR16-13A0A075B7E8 117 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 A0A087WWV3 80 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 TRAV25A0A0B4J276 109 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 SIRPB1O00241 398 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 PES1O00541 588 aaKnown RBP1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CHMP2AO43633 222 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF354AO60765 605 aaPredicted RBP1.76□□□□□ -2.13
GABPB1-209ENST00000559100 HUS1O60921 280 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CLPXO76031 633 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 OR2F2O95006 317 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CCNB2O95067 398 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 SNAPINO95295 136 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 MBP02144 154 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 FGF1P05230 155 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 GIPP09681 153 aaPredicted RBP1.76□□□□□ -2.13
GABPB1-209ENST00000559100 ACSM4P0C7M7 580 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CCNB1P14635 433 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF43P17038 809 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 TBPP20226 339 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 PSMB1P20618 241 aaKnown RBP1.76□□□□□ -2.13
GABPB1-209ENST00000559100 BCKDHBP21953 392 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CMA1P23946 247 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 FASP25445 335 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 DCKP27707 260 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 CD1BP29016 333 aa1.76□□□□□ -2.13
GABPB1-209ENST00000559100 SHC1P29353 583 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms