RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 MRASO14807 208 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 KRT34O76011 436 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 MT-ATP6P00846 226 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 OPN1SWP03999 348 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 NQO1P15559 274 aaKnown RBP15.4■□□□□ 0.06
SMAD3-210ENST00000559092 CDH2P19022 906 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-210ENST00000559092 TTKP33981 857 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 SLC25A3Q00325 362 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 LTBQ06643 244 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 NPTX1Q15818 432 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 MS4A18Q3C1V0 323 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 HIKESHIQ53FT3 197 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 ENTPD8Q5MY95 495 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 REP15Q6BDI9 236 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 ZNF544Q6NX49 715 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 ANKRD16Q6P6B7 361 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 UEVLDQ8IX04 471 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 PIK3C3Q8NEB9 887 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 BCL2L2Q92843 193 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-210ENST00000559092 MPP4Q96JB8 637 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 C1QTNF6Q9BXI9 259 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 POU2F3Q9UKI9 436 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
SMAD3-210ENST00000559092 ARPC4-TTLL3A0A0A6YYG9 625 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 TRAPPC13A5PLN9 417 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 E7EQL1 145 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 ATP8B1O43520 1251 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 TRAF3IP2O43734 574 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-210ENST00000559092 IFNA14P01570 189 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 MDH1P40925 334 aaKnown RBP15.39■□□□□ 0.05
SMAD3-210ENST00000559092 UBE2NP61088 152 aaKnown RBP15.39■□□□□ 0.05
SMAD3-210ENST00000559092 IL1RL1Q01638 556 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 ROR2Q01974 943 aaKnown RBP15.39■□□□□ 0.05
SMAD3-210ENST00000559092 LGALS3BPQ08380 585 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 PMS2P3Q13401 168 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 C3orf36Q3SXR2 165 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 TBRG1Q3YBR2 411 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 RABL3Q5HYI8 236 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 CLEC9AQ6UXN8 241 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 NHLRC1Q6VVB1 395 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 LINGO2Q7L985 606 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 PXKQ7Z7A4 578 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 SNX32Q86XE0 403 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 GPR137CQ8N3F9 429 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 FAM169BQ8N8A8 192 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 ADAMTS16Q8TE57 1224 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 LRR1Q96L50 414 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 ZNF583Q96ND8 569 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 ALKBH3Q96Q83 286 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-210ENST00000559092 OR2M2Q96R28 347 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 SLC19A3Q9BZV2 496 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 BAG5Q9UL15 447 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 AP3M1Q9Y2T2 418 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 CAPN7Q9Y6W3 813 aa15.39■□□□□ 0.05
SMAD3-210ENST00000559092 CADP27708 2225 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 USF3Q68DE3 2245 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 TRIM64A6NGJ6 449 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 TRIM64BA6NI03 449 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 CPSF4LA6NMK7 179 aaKnown RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 PLPP3O14495 311 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 CRYBA2P53672 197 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 PUDPQ08623 228 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 TTC33Q6PID6 262 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 CCDC36Q8IYA8 594 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 TMEM123Q8N131 208 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 FBXL14Q8N1E6 418 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 CIARTQ8N365 385 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 C10orf53Q8N6V4 93 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 OR4D11Q8NGI4 311 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 C10orf82Q8WW14 230 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 PROX1Q92786 737 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 MOGAT1Q96PD6 335 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 SMR3AQ99954 134 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 POLR2J2Q9GZM3 115 aaKnown RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 POLR2J3Q9H1A7 115 aaKnown RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 BARX1Q9HBU1 254 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-210ENST00000559092 GPR35Q9HC97 309 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 CBLN4Q9NTU7 201 aa15.38■□□□□ 0.05
SMAD3-210ENST00000559092 LYPD3O95274 346 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 HPRP00739 348 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 HEXAP06865 529 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 BMP4P12644 408 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 CBLP22681 906 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 CDKN1AP38936 164 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 FABP6P51161 128 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 SPOCK1Q08629 439 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 SF3A3Q12874 501 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 C20orf196Q8IYI0 205 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 MUC15Q8N387 334 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 OR5J2Q8NH18 312 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 RP9Q8TA86 221 aaKnown RBP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 VANGL1Q8TAA9 524 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 ADAD1Q96M93 576 aaKnown RBP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 ZNF426Q9BUY5 554 aa15.37■□□□□ 0.05
SMAD3-210ENST00000559092 CRNNQ9UBG3 495 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-210ENST00000559092 CCDC22O60826 627 aa15.36■□□□□ 0.05
SMAD3-210ENST00000559092 THY1P04216 161 aa15.36■□□□□ 0.05
SMAD3-210ENST00000559092 ARF1P84077 181 aaKnown RBP15.36■□□□□ 0.05
SMAD3-210ENST00000559092 ZP4Q12836 540 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms