RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PUDPQ08623 228 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 ZP4Q12836 540 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 CCNIQ14094 377 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 EXOC3L2Q2M3D2 409 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 ZNF770Q6IQ21 691 aaPredicted RBP10.09□□□□□ -0.79
SNX1-204ENST00000559061 MBOAT2Q6ZWT7 520 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 OR13C2Q8NGS9 318 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 OR52J3Q8NH60 311 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 LINC01560Q8TB33 94 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 CANT1Q8WVQ1 401 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 SGTBQ96EQ0 304 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 HS6ST2Q96MM7 605 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 OR2M2Q96R28 347 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 MCCC2Q9HCC0 563 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 SLC7A10Q9NS82 523 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 MED29Q9NX70 200 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 EMC3Q9P0I2 261 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 MALT1Q9UDY8 824 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 MED31Q9Y3C7 131 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 LYVE1Q9Y5Y7 322 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 TRAV27A0A087WT01 109 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 AQP12BA6NM10 295 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 GPR171O14626 319 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 GMNNO75496 209 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 UPK3AO75631 287 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ATP5HO75947 161 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 VAMP5O95183 116 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ADAP00813 363 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 POU2F1P14859 743 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 PSMB1P20618 241 aaKnown RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 AQP2P41181 271 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 HMGA2P52926 109 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 CLDN17P56750 224 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 KRTAP10-9P60411 292 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 SPIBQ01892 262 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 RUNX1T1Q06455 604 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 PPP1R8Q12972 351 aaKnown RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 PMS2P3Q13401 168 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 MFSD13AQ14CX5 517 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 TMEM225Q6GV28 225 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 CASP12Q6UXS9 341 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 Q6ZT83 130 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 TMPRSS11FQ6ZWK6 438 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ZER1Q7Z7L7 766 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 TMEM179BQ7Z7N9 219 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 AQP12AQ8IXF9 295 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 C10orf53Q8N6V4 93 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 PAPD5Q8NDF8 572 aaKnown RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 OR4K5Q8NGD3 323 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 APH1AQ96BI3 265 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 BPIFA2Q96DR5 249 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 FAM46AQ96IP4 442 aaKnown RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 WFIKKN1Q96NZ8 548 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 EMC6Q9BV81 110 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ASPNQ9BXN1 380 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 NELFAQ9H3P2 528 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 NANSQ9NR45 359 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 ELOVL5Q9NYP7 299 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
SNX1-204ENST00000559061 HIF3AQ9Y2N7 669 aa10.08□□□□□ -0.8
SNX1-204ENST00000559061 RAI1Q7Z5J4 1906 aaPredicted RBP10.07□□□□□ -0.8
SNX1-204ENST00000559061 DHRS12A0PJE2 317 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 FAM221AA4D161 298 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 C11orf98E9PRG8 122 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 LYZL6O75951 148 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 ADORA3P0DMS8 318 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 IFNGR1P15260 489 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 GTF2E2P29084 291 aaKnown RBP10.07□□□□□ -0.8
SNX1-204ENST00000559061 IST1P53990 364 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 POU3F1Q03052 451 aaPredicted RBP10.07□□□□□ -0.8
SNX1-204ENST00000559061 FLOT2Q14254 428 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 MELKQ14680 651 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 FGD3Q5JSP0 725 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 SFRP5Q5T4F7 317 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 FBXW9Q5XUX1 488 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 ANKRD34AQ69YU3 496 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 NIPAL3Q6P499 406 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 ZNF730Q6ZMV8 503 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 AAED1Q7RTV5 226 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 PXKQ7Z7A4 578 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 ZNF433Q8N7K0 673 aaPredicted RBP10.07□□□□□ -0.8
SNX1-204ENST00000559061 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 ALKBH3Q96Q83 286 aaPredicted RBP10.07□□□□□ -0.8
SNX1-204ENST00000559061 SLCO5A1Q9H2Y9 848 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 RCE1Q9Y256 329 aa10.07□□□□□ -0.8
SNX1-204ENST00000559061 SLC35F4A4IF30 521 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 DEFB108AA8MXU0 73 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 PTP4A3O75365 173 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 GADD45GO95257 159 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 CNOT4O95628 575 aaKnown RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 F13BP05160 661 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 RAP2AP10114 183 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms