RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 GLB1L3Q8NCI6 653 aaPredicted RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 MFSD8Q8NHS3 518 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 WDR60Q8WVS4 1066 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 GTF3AQ92664 365 aaKnown RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 AURKBQ96GD4 344 aaPredicted RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 ANKRD27Q96NW4 1050 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 ZNF385AQ96PM9 386 aaKnown RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 KCNS3Q9BQ31 491 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 SLC35A5Q9BS91 424 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 C1QTNF6Q9BXI9 259 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 DENND2DQ9H6A0 471 aaPredicted RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 C12orf10Q9HB07 376 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 SSU72Q9NP77 194 aaKnown RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 THUMPD1Q9NXG2 353 aaKnown RBP6.6□□□□□ -1.35
PCAT29-202ENST00000558941 RCE1Q9Y256 329 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 PCDHB14Q9Y5E9 798 aa6.6□□□□□ -1.35
PCAT29-202ENST00000558941 KMT2AQ03164 3969 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 TMEM129A0AVI4 362 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CCDC154A6NI56 674 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SMIM23A6NLE4 172 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CLDN24A6NM45 220 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 FTCDNL1E5RQL4 147 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ZNF587BE7ETH6 402 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 E9PBE3 544 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 AP3D1O14617 1153 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CPSF4O95639 269 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 KRT75O95678 551 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SERPINE1P05121 402 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ERCC1P07992 297 aaPredicted RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CHRM4P08173 479 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 OR4A8P0C604 315 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ZCCHC18P0CG32 403 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 LBPP18428 481 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 APEX1P27695 318 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 S100A3P33764 101 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CHI3L1P36222 383 aaPredicted RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ARR3P36575 388 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 UBE2NP61088 152 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ABCE1P61221 599 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 HPCAP84074 193 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 HGFACQ04756 655 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SCGB2A2Q13296 93 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 RIN1Q13671 783 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 MAPK11Q15759 364 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SYPL1Q16563 259 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 IQCCQ4KMZ1 466 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SPANXN4Q5MJ08 99 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 MRPL2Q5T653 305 aaKnown RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 RNF220Q5VTB9 566 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 PRAMEF8Q5VWM4 474 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 PRAMEF7Q5VXH5 474 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 C5orf46Q6UWT4 87 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 OLIG3Q7RTU3 272 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SPATA19Q7Z5L4 167 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 NET1Q7Z628 596 aaPredicted RBP6.59□□□□□ -1.35
PCAT29-202ENST00000558941 EPHX4Q8IUS5 362 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 PEX5LQ8IYB4 626 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 CLEC4FQ8N1N0 589 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 KIR3DL3Q8N743 410 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ANKFN1Q8N957 763 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 SYT14Q8NB59 555 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 OR6S1Q8NH40 331 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 AGR3Q8TD06 166 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 C22orf15Q8WYQ4 148 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 LRR1Q96L50 414 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 TAPBPLQ9BX59 468 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 NELFAQ9H3P2 528 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 ARMC7Q9H6L4 198 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 MEAF6Q9HAF1 191 aa6.59□□□□□ -1.35
PCAT29-202ENST00000558941 A0A0G2JPF8 293 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 HNRNPCL2B2RXH8 293 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 HNRNPCL3B7ZW38 293 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 TM9SF1O15321 606 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 ITM2AO43736 263 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 OR2T1O43869 369 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 HNRNPCL1O60812 293 aaKnown RBP6.58□□□□□ -1.36
PCAT29-202ENST00000558941 SPAG7O75391 227 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 KRT33AO76009 404 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 AKR7A3O95154 331 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 CECR9P0C854 216 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 HNRNPCL4P0DMR1 293 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 DAOP14920 347 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 CCNA2P20248 432 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 NPR2P20594 1047 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 MVDP53602 400 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 COPZ1P61923 177 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 MRPS11P82912 194 aaKnown RBP6.58□□□□□ -1.36
PCAT29-202ENST00000558941 OR7A5Q15622 319 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 SLC9B1Q4ZJI4 515 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 LIN52Q52LA3 116 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 HIKESHIQ53FT3 197 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 C9orf135Q5VTT2 229 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 C1orf140Q5VVS0 124 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 REP15Q6BDI9 236 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 C6orf89Q6UWU4 347 aa6.58□□□□□ -1.36
PCAT29-202ENST00000558941 MSANTD1Q6ZTZ1 278 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms