RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SLURP1P55000 103 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 PRPS1P60891 318 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 DEFA6Q01524 100 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 ADIPOQQ15848 244 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 C6orf136Q5SQH8 315 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 IL23RQ5VWK5 629 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 FRRS1Q6ZNA5 592 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 ZCCHC23Q6ZST2 131 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 CNPY4Q8N129 248 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 RAB8BQ92930 207 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 TMEM45BQ96B21 275 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 ALKBH3Q96Q83 286 aaPredicted RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 SLC38A2Q96QD8 506 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 PRPF18Q99633 342 aaKnown RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 SEC61A2Q9H9S3 476 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 EXOSC3Q9NQT5 275 aaKnown RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 EXD2Q9NVH0 621 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 MID2Q9UJV3 735 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 TMED7Q9Y3B3 224 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 WDR45Q9Y484 360 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 EIF1BO60739 113 aaKnown RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 PDE5AO76074 875 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OR4A8P0C604 315 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OR12D1P0DN82 309 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 G6PDP11413 515 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 ALDH3A1P30838 453 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 IDH2P48735 452 aaKnown RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 CLK1P49759 484 aaKnown RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 TUBA1BP68363 451 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 TUBA4AP68366 448 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 SLC35A1P78382 337 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 LGALS3BPQ08380 585 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 EFNB3Q15768 340 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 ZSWIM7Q19AV6 140 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 TBRG1Q3YBR2 411 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 CT83Q5H943 113 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OTUD3Q5T2D3 398 aaPredicted RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 OR4F3Q6IEY1 312 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 PAQR6Q6TCH4 344 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 RINLQ6ZS11 566 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 TUBA1AQ71U36 451 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 MYPOPQ86VE0 399 aaPredicted RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 ANKRD46Q86W74 232 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 IFT20Q8IY31 132 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 ARFGAP2Q8N6H7 521 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OR9K2Q8NGE7 335 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OR4A15Q8NGL6 344 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 MIPOL1Q8TD10 442 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OIT3Q8WWZ8 545 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 CNOT9Q92600 299 aaKnown RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 DDIT4LQ96D03 193 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 ZG16BQ96DA0 208 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 APOPT1Q96IL0 206 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 ZNF385AQ96PM9 386 aaKnown RBP8.36□□□□□ -1.07
SPG11-212ENST00000558790 SNX18Q96RF0 628 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 KCNS3Q9BQ31 491 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 KATNB1Q9BVA0 655 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 PLK3Q9H4B4 646 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 POLE3Q9NRF9 147 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 PARPBPQ9NWS1 579 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 OSGIN1Q9UJX0 560 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 PCDHGB4Q9UN71 923 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 TRAPPC4Q9Y296 219 aa8.36□□□□□ -1.07
SPG11-212ENST00000558790 WNK1Q9H4A3 2382 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 ARHGAP32A7KAX9 2087 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 B9A039 149 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 RNASET2O00584 256 aaKnown RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 ZNF208O43345 1280 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 AKR7A3O95154 331 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 STAMBPO95630 424 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 LGI1O95970 557 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 CRYAAP02489 173 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 C1QCP02747 245 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 GUSBP08236 651 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 TACSTD2P09758 323 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 CECR9P0C854 216 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 FKBP2P26885 142 aaKnown RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 GIFP27352 417 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 TACR3P29371 465 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 CALCRP30988 508 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 SRP14P37108 136 aaKnown RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 HTR3AP46098 478 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 KHKP50053 298 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 IDH3GP51553 393 aaPredicted RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 POLR2HP52434 150 aaKnown RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 CHN2P52757 468 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 CDH15P55291 814 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 KCNJ10P78508 379 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 HPCAP84074 193 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 NAAAQ02083 359 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 TRIP10Q15642 601 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 FAM174BQ3ZCQ3 159 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 C1QTNF12Q5T7M4 302 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 ATAD3BQ5T9A4 648 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 LINGO2Q7L985 606 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms