RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TNFSF4P23510 183 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 NFYBP25208 207 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 HTR5AP47898 357 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ACSM1Q08AH1 577 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TMEM176BQ3YBM2 270 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 CREB3L2Q70SY1 520 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 SLC43A2Q8N370 569 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OR7G3Q8NG95 312 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OR13C2Q8NGS9 318 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 FIBINQ8TAL6 211 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 SAGE1Q9NXZ1 904 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 EXO1Q9UQ84 846 aaKnown RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 ZNF443Q9Y2A4 671 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 DCTN6O00399 190 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 GPLD1P80108 840 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 LRIG1Q96JA1 1093 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 TM7SF3Q9NS93 570 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 DECR2Q9NUI1 292 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 ZNF487B1APH4 448 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CTSAP10619 480 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 FCGR2AP12318 317 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CNN3Q15417 329 aaKnown RBP12.96□□□□□ -0.33
SPG11-210ENST00000558319 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 ACVR1CQ8NER5 493 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CASD1Q96PB1 797 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 FYTTD1Q96QD9 318 aaKnown RBP12.96□□□□□ -0.33
SPG11-210ENST00000558319 OR7D2Q96RA2 312 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 SLC46A2Q9BY10 475 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 PLK3Q9H4B4 646 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 RAB40ALP0C0E4 278 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 RAB11AP62491 216 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 GPR176Q14439 515 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 TBPL2Q6SJ96 375 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CLEC9AQ6UXN8 241 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 PIANPQ8IYJ0 282 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CADM3Q8N126 398 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CD200R1Q8TD46 325 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 CLCF1Q9UBD9 225 aa12.96□□□□□ -0.33
SPG11-210ENST00000558319 ANGPTL7O43827 346 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 SCRG1O75711 98 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 PTBP3O95758 552 aaKnown RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 ALPLP05186 524 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 HMGN2P05204 90 aaKnown RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 ELLP55199 621 aaPredicted RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 CTBSQ01459 385 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 KCNAB1Q14722 419 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 OR1Q1Q15612 314 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 OR6V1Q8N148 313 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 ANKRD9Q96BM1 317 aaPredicted RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 BMFQ96LC9 184 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 OR5M11Q96RB7 305 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 RBFOX1Q9NWB1 397 aaKnown RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 HHLA2Q9UM44 414 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 A0A087WUU8 490 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 C17orf112F2Z3M2 114 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 FRMPD2BQ6IN97 320 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 TMEM182Q6ZP80 229 aaPredicted RBP12.96□□□□□ -0.34
SPG11-210ENST00000558319 KATNB1Q9BVA0 655 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 CHRDQ9H2X0 955 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 GPR45Q9Y5Y3 372 aa12.96□□□□□ -0.34
SPG11-210ENST00000558319 TAS2R46P59540 309 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SYPL1Q16563 259 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SFXN4Q6P4A7 337 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ESPNLQ6ZVH7 1005 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 MYF5P13349 255 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 GIPRP48546 466 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 EDDM3BP56851 147 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SLC7A9P82251 487 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TMEM244Q5VVB8 128 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 OR6T1Q8NGN1 323 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ZNF596Q8TC21 504 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 MYADMQ96S97 322 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TAF9BQ9HBM6 251 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ANTXRLA6NF34 631 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 PKLRP30613 574 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 HMGCLP35914 325 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 OR1D5P58170 312 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 DMRTC1Q5HYR2 192 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 RBMXL3Q8N7X1 1067 aaKnown RBP12.95□□□□□ -0.34
SPG11-210ENST00000558319 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 ARV1Q9H2C2 271 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 SLCO5A1Q9H2Y9 848 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 CUTCQ9NTM9 273 aa12.95□□□□□ -0.34
SPG11-210ENST00000558319 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms