RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 NQO1P15559 274 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 NR4A2P43354 598 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CDK6Q00534 326 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 EGR4Q05215 589 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 LGALS3BPQ08380 585 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 GGTLC2Q14390 218 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 EFNB3Q15768 340 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CARTPTQ16568 116 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 IQCCQ4KMZ1 466 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 TAAR8Q969N4 342 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 SPDL1Q96EA4 605 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 C7orf26Q96N11 449 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 PTDSS2Q9BVG9 487 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CRLF2Q9HC73 371 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 B3GAT2Q9NPZ5 323 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CCDC167Q9P0B6 97 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
SNRPA1-204ENST00000558020 A0A1B0GWA3 101 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 M0R082 166 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 LY6HO94772 140 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 IGKV3-15P01624 115 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 IGLV1-44P01699 117 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ARAFP10398 606 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 NPR2P20594 1047 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 HNF1AP20823 631 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 GRPRP30550 384 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 THBS2P35442 1172 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 CAPZA2P47755 286 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 PPOXP50336 477 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 IDH3GP51553 393 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ADIPOQQ15848 244 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 LRIF1Q5T3J3 769 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 FAM166AQ6J272 317 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 DHRS4L2Q6PKH6 230 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 LINGO2Q7L985 606 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 UEVLDQ8IX04 471 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ADPRHL1Q8NDY3 354 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 NUP37Q8NFH4 326 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 OR6S1Q8NH40 331 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 NFKBIDQ8NI38 313 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 FOXN4Q96NZ1 517 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 SORCS2Q96PQ0 1159 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF587Q96SQ5 575 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 CCDC28BQ9BUN5 200 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ASPNQ9BXN1 380 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 PLK3Q9H4B4 646 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 RABEP2Q9H5N1 569 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF442Q9H7R0 627 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 TESQ9UGI8 421 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 KCNS2Q9ULS6 477 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 USP22Q9UPT9 525 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 SPEF1Q9Y4P9 236 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 GMEB1Q9Y692 573 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 DNHD1Q96M86 4753 aa11.83□□□□□ -0.52
SNRPA1-204ENST00000558020 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF726A6NNF4 738 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 ZNF99A8MXY4 864 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 VIMP08670 466 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 APEHP13798 732 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 IDH3AP50213 366 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 RGS8P57771 180 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 TUBA1BP68363 451 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 TUBA4AP68366 448 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 PMS2P3Q13401 168 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 CEACAM16Q2WEN9 425 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 SWT1Q5T5J6 900 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 TUBA1AQ71U36 451 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 RANBP3LQ86VV4 465 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 ARMC8Q8IUR7 673 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 SCAIQ8N9R8 606 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 LRR1Q96L50 414 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 OR2M2Q96R28 347 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 TMEM38AQ9H6F2 299 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 SLC25A37Q9NYZ2 338 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 B3GAT1Q9P2W7 334 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 NOX1Q9Y5S8 564 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 STAB1Q9NY15 2570 aa11.82□□□□□ -0.52
SNRPA1-204ENST00000558020 A0A087WUJ7 227 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 M0R3G1 203 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 FZD7O75084 574 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 ENTPD5O75356 428 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 GPX2P18283 190 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 NPRL3Q12980 569 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 SCARB2Q14108 478 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 AGKQ53H12 422 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 AGBL2Q5U5Z8 902 aa11.81□□□□□ -0.52
SNRPA1-204ENST00000558020 UGT2A3Q6UWM9 527 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms