RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NOSIPQ9Y314 301 aaKnown RBP18.91■□□□□ 0.62
CASC4-204ENST00000557945 FLVCR1Q9Y5Y0 555 aa18.91■□□□□ 0.62
CASC4-204ENST00000557945 KLF4O43474 513 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 IL18BPO95998 194 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 HLA-DOBP13765 273 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 FPR3P25089 353 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 POU3F1Q03052 451 aaPredicted RBP18.9■□□□□ 0.62
CASC4-204ENST00000557945 ZP4Q12836 540 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 POU4F3Q15319 338 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 ZBED5Q49AG3 693 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 CREB3L2Q70SY1 520 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 NUFIP2Q7Z417 695 aaKnown RBP18.9■□□□□ 0.62
CASC4-204ENST00000557945 PXKQ7Z7A4 578 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 GALNT5Q7Z7M9 940 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 LIX1LQ8IVB5 337 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 OR6K3Q8NGY3 331 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 OR5K1Q8NHB7 308 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 STARD4Q96DR4 205 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 NRBF2Q96F24 287 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 FEVQ99581 238 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 MGAT4BQ9UQ53 548 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 HIF3AQ9Y2N7 669 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 NOX1Q9Y5S8 564 aa18.9■□□□□ 0.62
CASC4-204ENST00000557945 LOC102725191A0A1B0GVB3 256 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 SMNDC1O75940 238 aaKnown RBP eCLIP18.89■□□□□ 0.61
CASC4-204ENST00000557945 F13BP05160 661 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 ZNF23P17027 643 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 PRKACGP22612 351 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 UQCRC1P31930 480 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 GSSP48637 474 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 ELF3P78545 371 aaPredicted RBP18.89■□□□□ 0.61
CASC4-204ENST00000557945 TSPAN31Q12999 210 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 TAF11Q15544 211 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 BTLAQ7Z6A9 289 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 HIPK1Q86Z02 1210 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 EPHX4Q8IUS5 362 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 FAM26EQ8N5C1 309 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 ICA1LQ8NDH6 482 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 ANKK1Q8NFD2 765 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 CA5BP1Q8WTZ4 195 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 ITLN2Q8WWU7 325 aaPredicted RBP18.89■□□□□ 0.61
CASC4-204ENST00000557945 ZNF385AQ96PM9 386 aaKnown RBP18.89■□□□□ 0.61
CASC4-204ENST00000557945 NDEL1Q9GZM8 345 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 INIPQ9NRY2 104 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 PROCRQ9UNN8 238 aa18.89■□□□□ 0.61
CASC4-204ENST00000557945 MAGED1Q9Y5V3 778 aaPredicted RBP18.89■□□□□ 0.61
CASC4-204ENST00000557945 ARRDC5A6NEK1 342 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 FAM90A27PA6NNH2 459 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 EEF1E1-BLOC1S5C9J1V9 151 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 G3V2T6 193 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 EEF1E1O43324 174 aaKnown RBP18.88■□□□□ 0.61
CASC4-204ENST00000557945 MRPL33O75394 65 aaKnown RBP18.88■□□□□ 0.61
CASC4-204ENST00000557945 CLDN17P56750 224 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 RPS4XP62701 263 aaKnown RBP18.88■□□□□ 0.61
CASC4-204ENST00000557945 SRSF1Q07955 248 aaKnown RBP eCLIP18.88■□□□□ 0.61
CASC4-204ENST00000557945 ANKDD1AQ495B1 522 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 ALG10Q5BKT4 473 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 XKRXQ6PP77 449 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 CASP12Q6UXS9 341 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 AAED1Q7RTV5 226 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 IGFN1Q86VF2 1251 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 ZDHHC13Q8IUH4 622 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 ZNF808Q8N4W9 903 aaPredicted RBP18.88■□□□□ 0.61
CASC4-204ENST00000557945 ZIC4Q8N9L1 334 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 ATG16L2Q8NAA4 619 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 DGCR6LQ9BY27 220 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 MCCC2Q9HCC0 563 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 KIF17Q9P2E2 1029 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 SIGLEC7Q9Y286 467 aa18.88■□□□□ 0.61
CASC4-204ENST00000557945 INTS1Q8N201 2190 aaKnown RBP18.87■□□□□ 0.61
CASC4-204ENST00000557945 SAC3D1A6NKF1 404 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 H0YHG0 523 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 TRAF3IP2O43734 574 aaPredicted RBP18.87■□□□□ 0.61
CASC4-204ENST00000557945 TSPAN19P0C672 248 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 RPL4P36578 427 aaKnown RBP18.87■□□□□ 0.61
CASC4-204ENST00000557945 PRPS1P60891 318 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 FHL1Q13642 323 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.87■□□□□ 0.61
CASC4-204ENST00000557945 STK32CQ86UX6 486 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 ZNF100Q8IYN0 542 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 PQLC1Q8N2U9 271 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 LILRB4Q8NHJ6 448 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 FANK1Q8TC84 345 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 NIPSNAP1Q9BPW8 284 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 PIGMQ9H3S5 423 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 ZNF556Q9HAH1 456 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 FANCFQ9NPI8 374 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 PARPBPQ9NWS1 579 aa18.87■□□□□ 0.61
CASC4-204ENST00000557945 A0A1W2PRG6 482 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 PTP4A3O75365 173 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 NDUFB2O95178 105 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 ADAP00813 363 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 ANXA8P13928 327 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 IFNGR1P15260 489 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 AGAP20933 346 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 GSTM3P21266 225 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 NTF4P34130 210 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 CTXN1P60606 82 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 RCN1Q15293 331 aa18.86■□□□□ 0.61
CASC4-204ENST00000557945 NIPAL3Q6P499 406 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms