RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-235ENST00000557740 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
SHMT2-235ENST00000557740 IGKV1D-42A0A075B6H8 117 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 B9A039 149 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 RPL36A-HNRNPH2H7BZ11 118 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 PDE5AO76074 875 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ZNF432O94892 652 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 NQO1P15559 274 aaKnown RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CBLP22681 906 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 AQP1P29972 269 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CAPZA2P47755 286 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ATP4BP51164 291 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 NPRL3Q12980 569 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 SQLEQ14534 574 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 MST1LQ2TV78 715 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CEACAM16Q2WEN9 425 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 AGKQ53H12 422 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 PAGE3Q5JUK9 113 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CYB5R2Q6BCY4 276 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 NET1Q7Z628 596 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 RANBP3LQ86VV4 465 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ARMC8Q8IUR7 673 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 C10orf111Q8N326 155 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ADPRHL1Q8NDY3 354 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 BHLHE22Q8NFJ8 381 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 OR4F15Q8NGB8 312 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 SPATA3Q8NHX4 192 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 SLC47A1Q96FL8 570 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 OR2M2Q96R28 347 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 NELFAQ9H3P2 528 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 TMEM38AQ9H6F2 299 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 MYOZ1Q9NP98 299 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 CORINQ9Y5Q5 1042 aa12.73□□□□□ -0.37
SHMT2-235ENST00000557740 TRBV5-3A0A0A0MS03 114 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 NDUFS8O00217 210 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 TRAF3IP2O43734 574 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-235ENST00000557740 TPST1O60507 370 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 SERPINB7O75635 380 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 IGLV1-44P01699 117 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 OR4A8P0C604 315 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-235ENST00000557740 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 CARD17Q5XLA6 110 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 TMEM123Q8N131 208 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 C10orf53Q8N6V4 93 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 ANKS4BQ8N8V4 417 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 ATP6V1G3Q96LB4 118 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
SHMT2-235ENST00000557740 RABEP2Q9H5N1 569 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 IKZF5Q9H5V7 419 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 SEC61A2Q9H9S3 476 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 B3GAT2Q9NPZ5 323 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 GMEB1Q9Y692 573 aa12.72□□□□□ -0.37
SHMT2-235ENST00000557740 A0A0B4J2E0 115 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 A0A1B0GX12 115 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 RNF212BA8MTL3 300 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 VSTM5A8MXK1 200 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 ZNF99A8MXY4 864 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-235ENST00000557740 M0R3G1 203 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 SEC14L2O76054 403 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 IGKV3-15P01624 115 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 ERCC1P07992 297 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-235ENST00000557740 CELA3BP08861 270 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 IGHV4-31P0DP07 118 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 CBR1P16152 277 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 GPX2P18283 190 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 CALCRP30988 508 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 ARR3P36575 388 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 LSM11P83369 360 aaKnown RBP eCLIP12.71□□□□□ -0.37
SHMT2-235ENST00000557740 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-235ENST00000557740 OR1Q1Q15612 314 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 EFNB3Q15768 340 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 CYP51A1Q16850 503 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 SCAIQ8N9R8 606 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 NUP37Q8NFH4 326 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 PRR14Q9BWN1 585 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 RSPO3Q9BXY4 272 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-235ENST00000557740 BEX2Q9BXY8 128 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.37
SHMT2-235ENST00000557740 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms