RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 H2BFSP57053 126 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 RPS21P63220 83 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 MAT1AQ00266 395 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 LTBQ06643 244 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 MGAT2Q10469 447 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 UBXN2BQ14CS0 331 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ISXQ2M1V0 245 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 KIRREL2Q6UWL6 708 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 TMPRSS12Q86WS5 348 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 TMEFF1Q8IYR6 380 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OR2AK2Q8NG84 335 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OR5AK2Q8NH90 309 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF707Q96C28 371 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 RSPH9Q9H1X1 276 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CHURC1-FNTBB4DL54 471 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 GOSR2O14653 212 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 IMPA2O14732 288 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 XRCC3O43542 346 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 WDPCPO95876 746 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ANXA2P07355 339 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ADRA2CP18825 462 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 C5AR1P21730 350 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CTNNB1P35222 781 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 IGFALSP35858 605 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 TPMTP51580 245 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OC90Q02509 493 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 KIR2DS3Q14952 304 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CSRP2Q16527 193 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 FAM78AQ5JUQ0 283 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF684Q5T5D7 378 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CDH26Q8IXH8 852 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 EIF4E3Q8N5X7 224 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 TMEM52Q8NDY8 209 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OR52H1Q8NGJ2 320 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OR4C16Q8NGL9 310 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 OR5M9Q8NGP3 310 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ZPLD1Q8TCW7 415 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 RASD2Q96D21 266 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 APOOQ9BUR5 198 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ALG12Q9BV10 488 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 RNF208Q9H0X6 261 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 TBC1D29Q9UFV1 150 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF337Q9Y3M9 751 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A1B0GW55 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TCRBV16S1A1N1A0A5B0 115 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 PRR32B1ATL7 298 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L2P0CJ85 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L3P0CJ86 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L4P0CJ87 422 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L5P0CJ88 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L6P0CJ89 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4L7P0CJ90 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TMIGD3P0DMS9 266 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR8G3PP0DMU2 310 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SOX2P48431 317 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SCAND1P57086 179 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ERVK-25P63136 954 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 HTRA4P83105 476 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ALKBH1Q13686 389 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 MPPED2Q15777 294 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 C2orf68Q2NKX9 166 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 KRT77Q7Z794 578 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF227Q86WZ6 799 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR52R1Q8NGF1 315 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR1S1Q8NH92 325 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TNFAIP8L1Q8WVP5 186 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 PMEPA1Q969W9 287 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 RBM18Q96H35 190 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR2M4Q96R27 311 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 GPR174Q9BXC1 333 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SEMA4CQ9C0C4 833 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TRPV4Q9HBA0 871 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 DUX4Q9UBX2 424 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A1W2PQU0 124 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 D6RAR5 112 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 TNFSF14O43557 240 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SDC3O75056 442 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ITGB8P26012 769 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNHIT3Q15649 155 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 LINC01590Q5TEZ4 76 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF660Q6AZW8 331 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR7E24Q6IFN5 339 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 LEG1Q6P5S2 330 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 PSRC1Q6PGN9 363 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 C11orf88Q6PI97 169 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 FIGLAQ6QHK4 219 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC16A9Q7RTY1 509 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 LRRTM1Q86UE6 522 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 STPG2Q8N412 459 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 OR6N1Q8NGY5 312 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 ASB13Q8WXK3 278 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 FBXW5Q969U6 566 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 CTHRC1Q96CG8 243 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 SIPA1Q96FS4 1042 aa10.79□□□□□ -0.68
VIPAS39-211ENST00000557658 PELOQ9BRX2 385 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms