RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NSRP1Q9H0G5 558 aaKnown RBP3.29□□□□□ -1.88
PRPF39-210ENST00000556718 PPA2Q9H2U2 334 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 ANKRD19PQ9H560 264 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 THUMPD1Q9NXG2 353 aaKnown RBP3.29□□□□□ -1.88
PRPF39-210ENST00000556718 IFNKQ9P0W0 207 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 PSMC3IPQ9P2W1 217 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-210ENST00000556718 APOBEC3BQ9UH17 382 aaKnown RBP3.29□□□□□ -1.88
PRPF39-210ENST00000556718 SLC7A8Q9UHI5 535 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 E9PCH4 1651 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 SMARCA4P51532 1647 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 ASXL1Q8IXJ9 1541 aa3.29□□□□□ -1.88
PRPF39-210ENST00000556718 ZNF608Q9ULD9 1512 aaPredicted RBP3.29□□□□□ -1.88
PRPF39-210ENST00000556718 MYOM2P54296 1465 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 SH3TC1Q8TE82 1336 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IGHV7-81A0A0B4J1V7 117 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 LRRIQ4A6NIV6 560 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 C9JVG2 144 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CETN3O15182 167 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CYTH3O43739 400 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 UPK3AO75631 287 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ATP5HO75947 161 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CLTAP09496 248 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 RHOXF2BP0C7M4 288 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IGLL1P15814 213 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ZP3P21754 424 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IFNA8P32881 189 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 HSD17B2P37059 387 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 OPRD1P41143 372 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ATP5OP48047 213 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 SERPINB8P50452 374 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 GPM6AP51674 278 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ARPC4P59998 168 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 PLP1P60201 277 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ELF3P78545 371 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 TLE4Q04727 773 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 SCRN3Q0VDG4 424 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 GNMTQ14749 295 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 AANATQ16613 207 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 MICBQ29980 383 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CCDC153Q494R4 210 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 XKR7Q5GH72 579 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 THOC7Q6I9Y2 204 aaKnown RBP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ACOT7LQ6ZUV0 252 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IFT20Q8IY31 132 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 GPR137CQ8N3F9 429 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 RNF10Q8N5U6 811 aaKnown RBP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 BBOF1Q8ND07 529 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 OR52H1Q8NGJ2 320 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 IFT81Q8WYA0 676 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 HAUS1Q96CS2 278 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 HAVCR1Q96D42 359 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 PLEKHA8Q96JA3 519 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CATSPER2Q96P56 530 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 RANBP9Q96S59 729 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CNN2Q99439 309 aaKnown RBP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 CHP1Q99653 195 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 KIR2DL4Q99706 377 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 RHOXF2Q9BQY4 288 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 C19orf24Q9BVV8 132 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ILKAPQ9H0C8 392 aaPredicted RBP3.28□□□□□ -1.88
PRPF39-210ENST00000556718 NEK6Q9HC98 313 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 KLHL21Q9UJP4 597 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 BIVM-ERCC5R4GMW8 1640 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 ERCC6Q03468 1493 aa3.28□□□□□ -1.88
PRPF39-210ENST00000556718 NUP160Q12769 1436 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 ADGRL3Q9HAR2 1447 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PCNX3Q9H6A9 2034 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TTC21AQ8NDW8 1320 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TCP11X1B4DZS4 312 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 SPECC1L-ADORA2AF8WAN1 911 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 ABCD4O14678 606 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 LSM1O15116 133 aaKnown RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PSTPIP1O43586 416 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 LYPLA1O75608 230 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 LGI1O95970 557 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 MMP1P03956 469 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 KLK3P07288 261 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 OR8U8P0C7N1 319 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 MDH2P40926 338 aaKnown RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 HLCSP50747 726 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 VSNL1P62760 191 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 MYL5Q02045 173 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 GBE1Q04446 702 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TGM3Q08188 693 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 OR5I1Q13606 314 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 VGLL4Q14135 290 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 GK3PQ14409 553 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 GRB7Q14451 532 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TGFBIQ15582 683 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PRR4Q16378 134 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 BCL7AQ4VC05 210 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 SPANXN2Q5MJ10 180 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TFAP2EQ6VUC0 442 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PPP1R27Q86WC6 154 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms