RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 GALNT5Q7Z7M9 940 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 FANK1Q8TC84 345 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 SFXN3Q9BWM7 321 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 BCO1Q9HAY6 547 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 MCCC2Q9HCC0 563 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 HIF3AQ9Y2N7 669 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 FLVCR1Q9Y5Y0 555 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 IGKV3D-15A0A087WSY6 115 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF724A8MTY0 619 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 DVL2O14641 736 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 TNFSF13O75888 250 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 UQCRC1P31930 480 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 OPRM1P35372 400 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 GSSP48637 474 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 SLC16A1P53985 500 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 CLDN17P56750 224 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 RPS4XP62701 263 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 TOP3AQ13472 1001 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 PDK3Q15120 406 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 ANKRD34AQ69YU3 496 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 AAED1Q7RTV5 226 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 PXKQ7Z7A4 578 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 MRGPRGQ86SM5 289 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 EPHX4Q8IUS5 362 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 NRBF2Q96F24 287 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 TACO1Q9BSH4 297 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 NDEL1Q9GZM8 345 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 GP6Q9HCN6 339 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 INIPQ9NRY2 104 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 MED29Q9NX70 200 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 NOX1Q9Y5S8 564 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 SVILO95425 2214 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 ARRDC5A6NEK1 342 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 PDLIM1O00151 329 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 MRPL33O75394 65 aaKnown RBP12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 SOX14O95416 240 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 ADAP00813 363 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 CRHP06850 196 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 ANPEPP15144 967 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 IFNGR1P15260 489 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 GSTM3P21266 225 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 CHRNB4P30926 498 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 PRPS1P60891 318 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 MELKQ14680 651 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 POU4F3Q15319 338 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 CARD17Q5XLA6 110 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 SMARCD3Q6STE5 483 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 LIX1LQ8IVB5 337 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 SVOPLQ8N434 492 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 CIB1Q99828 191 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 EMC6Q9BV81 110 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 UCK2Q9BZX2 261 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 EGLN3Q9H6Z9 239 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 SIGLEC7Q9Y286 467 aa12.47□□□□□ -0.41
VIPAS39-208ENST00000556412 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 NDUFB2O95178 105 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 IGHV3-9P01782 118 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 ANXA8P13928 327 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 CTXN1P60606 82 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 ZP4Q12836 540 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 FHL1Q13642 323 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 GUSBP1Q15486 140 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 ANKDD1AQ495B1 522 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 CLEC12AQ5QGZ9 265 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 SLC35D2Q76EJ3 337 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 ZIC4Q8N9L1 334 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 ASB5Q8WWX0 329 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 STARD4Q96DR4 205 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 DGCR6LQ9BY27 220 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 POLDIP3Q9BY77 421 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 OPN3Q9H1Y3 402 aaPredicted RBP12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 OR52D1Q9H346 318 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 SMURF2Q9HAU4 748 aa12.46□□□□□ -0.41
VIPAS39-208ENST00000556412 FREM3P0C091 2139 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 LOC102725191A0A1B0GVB3 256 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 H3BN98 237 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 PTP4A3O75365 173 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 BCL10O95999 233 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 ZNF26P17031 533 aaPredicted RBP12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 EDNRAP25101 427 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 POU1F1P28069 291 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 SELENOPP49908 381 aa12.46□□□□□ -0.42
VIPAS39-208ENST00000556412 BIDP55957 195 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms