RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OR2B2Q9GZK3 357 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 LAT2Q9GZY6 243 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SIAEQ9HAT2 523 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 AMBNQ9NP70 447 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ACKR4Q9NPB9 350 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MED17Q9NVC6 651 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 QPCTLQ9NXS2 382 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SELENONQ9NZV5 590 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SLC13A4Q9UKG4 626 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SLC35A3Q9Y2D2 325 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 IFT52Q9Y366 437 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PHF3Q92576 2039 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 OR2M5A3KFT3 312 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SNTNA6NMZ2 147 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 H3BN98 237 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 CCRL2O00421 344 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 AP3D1O14617 1153 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 LRRTM2O43300 516 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SUSD5O60279 629 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 EIF4E2O60573 245 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 HCN1O60741 890 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ENTPD6O75354 484 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 WISP1O95388 367 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 IGHG3P01860 377 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 TP53P04637 393 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 BMP4P12644 408 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 NID1P14543 1247 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 BMP7P18075 431 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 POU3F2P20265 443 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 FUT4P22083 530 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MSX1P28360 303 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 RANBP1P43487 201 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PPP5CP53041 499 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 FOXF1Q12946 379 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 FOXD4Q12950 439 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SKP2Q13309 424 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PIN1Q13526 163 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 CBFBQ13951 182 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 OXA1LQ15070 435 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 GXYLT1Q4G148 440 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM236Q5W0B7 351 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PLXDC2Q6UX71 529 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 NCCRP1Q6ZVX7 275 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 RBM45Q8IUH3 476 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 LACC1Q8IV20 430 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 CADM2Q8N3J6 435 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 OR4K5Q8NGD3 323 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 OR5W2Q8NH69 310 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 GNPDA2Q8TDQ7 276 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SARAFQ96BY9 339 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF524Q96C55 264 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 DNAJA3Q96EY1 480 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM80Q96HE8 168 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MGLLQ99685 303 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MND1Q9BWT6 205 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PRRG3Q9BZD7 231 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 POLR2J2Q9GZM3 115 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MAN2C1Q9NTJ4 1040 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 KLHL28Q9NXS3 571 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ICAM5Q9UMF0 924 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF337Q9Y3M9 751 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 TENM4Q6N022 2769 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 MED12LQ86YW9 2145 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 DOPEY2Q9Y3R5 2298 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 DOCK7Q96N67 2140 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 IGLV3-32A0A0A0MS00 114 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 ISPDA4D126 451 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 H0YC42 278 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 M0R3H8 397 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 CCL21O00585 134 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 AQP7O14520 342 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 MAGEB3O15480 346 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 ADAM11O75078 769 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 EPPINO95925 133 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 SCG5P05408 212 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PRG2P13727 222 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PGCP20142 388 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 IL11P20809 199 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 RPS4Y1P22090 263 aaKnown RBP8.88□□□□□ -0.99
PSEN1-213ENST00000555386 SFTPDP35247 375 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 SOX6P35712 828 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PCYT1AP49585 367 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 SMSP52788 366 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 B3GALT5-AS1P59052 145 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 EEF1A1P68104 462 aaKnown RBP8.88□□□□□ -0.99
PSEN1-213ENST00000555386 CDK5Q00535 292 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF45Q02386 682 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PLAURQ03405 335 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 ST3GAL3Q11203 375 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 TRAM2Q15035 370 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 QPRTQ15274 297 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 TMEM44Q2T9K0 475 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PLPPR5Q32ZL2 321 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 ZER1Q7Z7L7 766 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 DOLPP1Q86YN1 238 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 PROKR2Q8NFJ6 384 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 OR6T1Q8NGN1 323 aa8.88□□□□□ -0.99
PSEN1-213ENST00000555386 FAM57AQ8TBR7 257 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms