RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ADAP00813 363 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 IFNW1P05000 195 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 THBDP07204 575 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 CD3EP07766 207 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 UMPSP11172 480 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 PSMB1P20618 241 aaKnown RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 HTR2AP28223 471 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 GSK3BP49841 420 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SLC16A1P53985 500 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 CDH12P55289 794 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SELENOWP63302 87 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 TGFBR3Q03167 851 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ST3GAL3Q11203 375 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ITGADQ13349 1161 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 PMS2P3Q13401 168 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 KRT72Q14CN4 511 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 DAZAP2Q15038 168 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 NPTX1Q15818 432 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 IFI44LQ53G44 452 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 FBXW9Q5XUX1 488 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 TFAP2EQ6VUC0 442 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 Q6ZT83 130 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 LHFPL2Q6ZUX7 228 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 C22orf34Q6ZV56 151 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 H1FNTQ75WM6 255 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 RRM2BQ7LG56 351 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 AAED1Q7RTV5 226 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 PGAM4Q8N0Y7 254 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM99Q8N816 258 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 POMGNT2Q8NAT1 580 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 GPR32P1Q8NGA4 272 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 OR9K2Q8NGE7 335 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 OR6T1Q8NGN1 323 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ADAMTS16Q8TE57 1224 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 GEMIN6Q8WXD5 167 aaKnown RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 MUCL1Q96DR8 90 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SLC41A3Q96GZ6 507 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ZC3HAV1LQ96H79 300 aaKnown RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 NSL1Q96IY1 281 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 HS6ST2Q96MM7 605 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM43Q9BTV4 400 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SLC19A3Q9BZV2 496 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ACTR6Q9GZN1 396 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 ASB6Q9NWX5 421 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SLC7A7Q9UM01 511 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 SAMD4AQ9UPU9 718 aaKnown RBP7.39□□□□□ -1.23
PSEN1-209ENST00000553855 B3GALT5Q9Y2C3 310 aa7.39□□□□□ -1.23
PSEN1-209ENST00000553855 COL12A1Q99715 3063 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 PCNX1Q96RV3 2341 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 MED12Q93074 2177 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF716A6NP11 495 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 NME4O00746 187 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 GCM2O75603 506 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-209ENST00000553855 OR5F1O95221 314 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 MT-ATP6P00846 226 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 SERPINA1P01009 418 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 THRBP10828 461 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 PRF1P14222 555 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 GGT1P19440 569 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 CALB2P22676 271 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 CBLP22681 906 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 AHCYP23526 432 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 GRPRP30550 384 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 NR1H2P55055 460 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 H3F3AP84243 136 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 SLC17A1Q14916 467 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 TAF11Q15544 211 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 TESK1Q15569 626 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 STK11Q15831 433 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 SPATS1Q496A3 300 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 GLYATQ6IB77 296 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 KLHL24Q6TFL4 600 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 STAC2Q6ZMT1 411 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 BHLHA15Q7RTS1 189 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-209ENST00000553855 CXorf67Q86X51 503 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-209ENST00000553855 UEVLDQ8IX04 471 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 CDK20Q8IZL9 346 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 SCAIQ8N9R8 606 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 BCAS4Q8TDM0 211 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 HSD17B8Q92506 261 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 TAAR8Q969N4 342 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 MCUR1Q96AQ8 359 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM45BQ96B21 275 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 KTI12Q96EK9 354 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-209ENST00000553855 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 LURAP1Q96LR2 239 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 WFIKKN1Q96NZ8 548 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 OXGR1Q96P68 337 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 FNDC11Q9BVV2 318 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 NDEL1Q9GZM8 345 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 KRCC1Q9NPI7 259 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-209ENST00000553855 B3GAT2Q9NPZ5 323 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 RASSF1Q9NS23 344 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 ABCD2Q9UBJ2 740 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 TESMINQ9Y4I5 508 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 FLVCR1Q9Y5Y0 555 aa7.38□□□□□ -1.23
PSEN1-209ENST00000553855 HTR3EA5X5Y0 456 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF726A6NNF4 738 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms