RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ASPNQ9BXN1 380 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
MTHFD1-204ENST00000553405 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 OR10H3O60404 316 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 CCNB2O95067 398 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 GASTP01350 101 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 CD8BP10966 210 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 FCGR1AP12314 374 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 FASP25445 335 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 OPRM1P35372 400 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 ANKDD1AQ495B1 522 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 GTF2IRD2BQ6EKJ0 949 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 TFAP2EQ6VUC0 442 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 MRGPRGQ86SM5 289 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 GTF2IRD2Q86UP8 949 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 KIF18BQ86Y91 864 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 ASB5Q8WWX0 329 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 SDCCAG3Q96C92 435 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 NRBF2Q96F24 287 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
MTHFD1-204ENST00000553405 NPIPB13A6NJU9 1138 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 NPIPB4C9JG80 1138 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 BMP5P22003 454 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GTF2E2P29084 291 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 OR3A2P47893 321 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 PER3P56645 1201 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 SIRPAP78324 504 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 ELF3P78545 371 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 FBXL19-AS1Q494R0 122 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 ZBED5Q49AG3 693 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 TMEM225Q6GV28 225 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 CD300LDQ6UXZ3 194 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 TMEM123Q8N131 208 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 AQP11Q8NBQ7 271 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 CENPNQ96H22 339 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 FEVQ99581 238 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 UCK2Q9BZX2 261 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 GABARAPL1Q9H0R8 117 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 NOX1Q9Y5S8 564 aa13.15□□□□□ -0.3
MTHFD1-204ENST00000553405 UNC119BA6NIH7 251 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 GPR171O14626 319 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 AGFG2O95081 481 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 IGHMP01871 453 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 SAGP10523 405 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 PRKACGP22612 351 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 SMSP52788 366 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 POU3F1Q03052 451 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 SLC25A35Q3KQZ1 300 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 ARMC4Q5T2S8 1044 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 XKRXQ6PP77 449 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 OAFQ86UD1 273 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 MCEMP1Q8IX19 187 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 CNEP1R1Q8N9A8 125 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 OR5K1Q8NHB7 308 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 GNPDA2Q8TDQ7 276 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 OPN3Q9H1Y3 402 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 MED29Q9NX70 200 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 PDP1Q9P0J1 537 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 REV1Q9UBZ9 1251 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 MGAT4BQ9UQ53 548 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 EMC9Q9Y3B6 208 aa13.14□□□□□ -0.31
MTHFD1-204ENST00000553405 A8MXE2 369 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 MCIDASD6RGH6 385 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 PDLIM1O00151 329 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 GNGT2O14610 69 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 DVL2O14641 736 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 MSTNO14793 375 aa13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 PLGP00747 810 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-204ENST00000553405 ADAP00813 363 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms