RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SELENONQ9NZV5 590 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 NOX1Q9Y5S8 564 aa8.63□□□□□ -1.03
ACTN1-208ENST00000553370 IGHV4-61A0A0C4DH41 118 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SH3PXD2BA1X283 911 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 PRAMEF27A3QJZ7 478 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 CDHR4A6H8M9 788 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 NR5A2O00482 541 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 IL6P05231 212 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 CECR9P0C854 216 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 ETFAP13804 333 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 IDO1P14902 403 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 DAOP14920 347 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 IFNGR1P15260 489 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 NQO1P15559 274 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF23P17027 643 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 NPR2P20594 1047 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 PCMT1P22061 227 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 RPS4Y1P22090 263 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 PPOXP50336 477 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 NAAAQ02083 359 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SNTB2Q13425 540 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 CR1LQ2VPA4 569 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF311Q5JNZ3 666 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SVOPLQ8N434 492 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 GLB1L3Q8NCI6 653 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 MGARPQ8TDB4 240 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 AENQ8WTP8 325 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 ZNF317Q96PQ6 595 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SNX18Q96RF0 628 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SORT1Q99523 831 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 PLK3Q9H4B4 646 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 RAD21L1Q9H4I0 556 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 B3GAT2Q9NPZ5 323 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 THUMPD1Q9NXG2 353 aaKnown RBP8.62□□□□□ -1.03
ACTN1-208ENST00000553370 SLC13A4Q9UKG4 626 aa8.62□□□□□ -1.03
ACTN1-208ENST00000553370 ARPC4-TTLL3A0A0A6YYG9 625 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 AIM2O14862 343 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 TCF21O43680 179 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 UPK3AO75631 287 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SLC22A3O75751 556 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 HTR3BO95264 441 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ALDOCP09972 364 aaKnown RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 TFPTP0C1Z6 253 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 PNMTP11086 282 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 EPHA3P29320 983 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 LSP1P33241 339 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 BST1Q10588 318 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CCNIQ14094 377 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ADIPOQQ15848 244 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ADRM1Q16186 407 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CEP85LQ5SZL2 805 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 GKAP1Q5VSY0 366 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 RNF220Q5VTB9 566 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CARD17Q5XLA6 110 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 OGFOD2Q6N063 350 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 RINLQ6ZS11 566 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CREB3L2Q70SY1 520 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 HDXQ7Z353 690 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SERPINA11Q86U17 422 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 C10orf53Q8N6V4 93 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ZIC4Q8N9L1 334 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 PIK3C3Q8NEB9 887 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 NEU4Q8WWR8 484 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 BCL2L2Q92843 193 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SLC38A4Q969I6 547 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ZBTB9Q96C00 473 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 TMEM19Q96HH6 336 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 ITCHQ96J02 903 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 CRLF2Q9HC73 371 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■□□ 15.7
ACTN1-208ENST00000553370 USP22Q9UPT9 525 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 RCE1Q9Y256 329 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 IFT52Q9Y366 437 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 SPEF1Q9Y4P9 236 aa8.61□□□□□ -1.03
ACTN1-208ENST00000553370 V9GYY5 206 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-208ENST00000553370 A0A0G2JPF8 293 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 LRP5LA4QPB2 252 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 B2RBV5 119 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 VWC2LB2RUY7 222 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 HNRNPCL2B2RXH8 293 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 HNRNPCL3B7ZW38 293 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 SDHDO14521 159 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 HDAC3O15379 428 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 HNRNPCL1O60812 293 aaKnown RBP8.6□□□□□ -1.03
ACTN1-208ENST00000553370 SEC14L2O76054 403 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 C1QCP02747 245 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 CELA3BP08861 270 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 HNRNPCL4P0DMR1 293 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 CD79AP11912 226 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 THBS2P35442 1172 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 THBS4P35443 961 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 ARR3P36575 388 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 STX1BP61266 288 aa8.6□□□□□ -1.03
ACTN1-208ENST00000553370 ARF1P84077 181 aaKnown RBP8.6□□□□□ -1.03
ACTN1-208ENST00000553370 GALK2Q01415 458 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms