RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 LRRC75A-AS1Q8N1F1 130 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 ANKK1Q8NFD2 765 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 SLC26A7Q8TE54 656 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF837Q96EG3 531 aaPredicted RBP16.89■□□□□ 0.29
PTCH1-227ENST00000553256 ESRP2Q9H6T0 727 aaKnown RBP16.89■□□□□ 0.29
PTCH1-227ENST00000553256 FAM53CQ9NYF3 392 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 TAS2R5Q9NYW4 299 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 A4GNTQ9UNA3 340 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 USF3Q68DE3 2245 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 A0A1W2PR80 420 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 OR6C65A6NJZ3 312 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 OR5F1O95221 314 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF43P17038 809 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 CBLP22681 906 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 GNGT1P63211 74 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ZP4Q12836 540 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 PIN1Q13526 163 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF672Q499Z4 452 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 C9orf135Q5VTT2 229 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 KBTBD8Q8NFY9 601 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 OR1K1Q8NGR3 316 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 OR52N5Q8NH56 324 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 LIPHQ8WWY8 451 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 AKAP1Q92667 903 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 PROX1Q92786 737 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 BCL2L2Q92843 193 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 PIGTQ969N2 578 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 CMTM5Q96DZ9 223 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 TXNDC15Q96J42 360 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ALKBH3Q96Q83 286 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ALG2Q9H553 416 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 NGBQ9NPG2 151 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF701Q9NV72 531 aaPredicted RBP16.88■□□□□ 0.29
PTCH1-227ENST00000553256 SELENONQ9NZV5 590 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 UPB1Q9UBR1 384 aa16.88■□□□□ 0.29
PTCH1-227ENST00000553256 CIB4A0PJX0 185 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 OVOL3O00110 214 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 FFAR1O14842 300 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 SHOX2O60902 331 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-227ENST00000553256 PRSS23O95084 383 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 CD3EP07766 207 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 UGT2B15P54855 530 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 PSME3P61289 254 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 PUDPQ08623 228 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 PGGHGQ32M88 737 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 LRRC23Q53EV4 343 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-227ENST00000553256 CBLL1Q75N03 491 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 PXKQ7Z7A4 578 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 VTCN1Q7Z7D3 282 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 LRRC17Q8N6Y2 441 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 WFDC11Q8NEX6 87 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 OR5J2Q8NH18 312 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 MAGEE2Q8TD90 523 aaPredicted RBP16.87■□□□□ 0.29
PTCH1-227ENST00000553256 MUCL1Q96DR8 90 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 FKRPQ9H9S5 495 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 MAN2C1Q9NTJ4 1040 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 RIMS3Q9UJD0 308 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 SNX13Q9Y5W8 968 aa16.87■□□□□ 0.29
PTCH1-227ENST00000553256 CXCR6O00574 342 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 DYNC1I1O14576 645 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 IFNA14P01570 189 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 SOD3P08294 240 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 THRBP10828 461 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 CD40P25942 277 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 GTF2E2P29084 291 aaKnown RBP16.86■□□□□ 0.29
PTCH1-227ENST00000553256 RBM34P42696 430 aaKnown RBP16.86■□□□□ 0.29
PTCH1-227ENST00000553256 NUDT2P50583 147 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 LSM11P83369 360 aaKnown RBP eCLIP16.86■□□□□ 0.29
PTCH1-227ENST00000553256 SPOCK1Q08629 439 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 HIKESHIQ53FT3 197 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 ALKBH2Q6NS38 261 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 CPLX4Q7Z7G2 160 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 C20orf196Q8IYI0 205 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 ANKS4BQ8N8V4 417 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 TMEM255BQ8WV15 326 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 CCL19Q99731 98 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 ASPNQ9BXN1 380 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 GSX2Q9BZM3 304 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 NSRP1Q9H0G5 558 aaKnown RBP16.86■□□□□ 0.29
PTCH1-227ENST00000553256 C20orf141Q9NUB4 165 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 CRNNQ9UBG3 495 aaPredicted RBP16.86■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF229Q9UJW7 825 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 NOX1Q9Y5S8 564 aa16.86■□□□□ 0.29
PTCH1-227ENST00000553256 ARPC4-TTLL3A0A0A6YYG9 625 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF587BE7ETH6 402 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 TMCC2O75069 709 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 CH25HO95992 272 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 CD8AP01732 235 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 TGFBR3Q03167 851 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 FOXD4Q12950 439 aaPredicted RBP16.85■□□□□ 0.29
PTCH1-227ENST00000553256 PMS2P3Q13401 168 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 TBRG1Q3YBR2 411 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 TTC33Q6PID6 262 aaPredicted RBP16.85■□□□□ 0.29
PTCH1-227ENST00000553256 ZNF627Q7L945 461 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 UEVLDQ8IX04 471 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 PFN4Q8NHR9 129 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 RNF217Q8TC41 542 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 LRR1Q96L50 414 aa16.85■□□□□ 0.29
PTCH1-227ENST00000553256 GPR35Q9HC97 309 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms