RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NOX1Q9Y5S8 564 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 ENPP4Q9Y6X5 453 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 V9GYQ6 96 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 AKAP6Q13023 2319 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 DEFB108AA8MXU0 73 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 C11orf98E9PRG8 122 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 PLPP3O14495 311 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 TRAF3IP2O43734 574 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 MPGP29372 298 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 MSX2P35548 267 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 TAB1Q15750 504 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 FXNQ16595 210 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 C9orf135Q5VTT2 229 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 OR7E24Q6IFN5 339 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 P2RY8Q86VZ1 359 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 PFN4Q8NHR9 129 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 ALKBH3Q96Q83 286 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 MEPEQ9NQ76 525 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 RHCGQ9UBD6 479 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 SPG11Q96JI7 2443 aa16.29■□□□□ 0.2
PRPF40B-216ENST00000552301 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 MS4A18H0YCH9 400 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 J3KTA2 159 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 RNF13O43567 381 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 HPRP00739 348 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 ITGA5P08648 1049 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 NR1H2P55055 460 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 PPA1Q15181 289 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 MS4A18Q3C1V0 323 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 TIMM23BQ5SRD1 257 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 HMBOX1Q6NT76 420 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 KLHL24Q6TFL4 600 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 RINLQ6ZS11 566 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 C22orf34Q6ZV56 151 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 PXKQ7Z7A4 578 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 GPR137CQ8N3F9 429 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 C1orf162Q8NEQ5 155 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 ANKK1Q8NFD2 765 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
PRPF40B-216ENST00000552301 OR5H1A6NKK0 313 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF726A6NNF4 738 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 OR7A10O76100 309 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 STAMBPO95630 424 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 IGF2P01344 180 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 ITGA2P17301 1181 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 CDH2P19022 906 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 FUT1P19526 365 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF730Q6ZMV8 503 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 RRM2BQ7LG56 351 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 SLC46A3Q7Z3Q1 461 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 PLPPR2Q96GM1 343 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 PYURFQ96I23 114 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 LINC00470Q9BZP3 86 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 MUC13Q9H3R2 512 aa16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 PRPF19Q9UMS4 504 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-216ENST00000552301 APCP25054 2843 aa16.27■□□□□ 0.19
PRPF40B-216ENST00000552301 PRR14LQ5THK1 2151 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 HTR3EA5X5Y0 456 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 BLOC1S5-TXNDC5H3BN57 136 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 hCG_2039718K7EN88 272 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 PDLIM1O00151 329 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 SIAH2O43255 324 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 PIP5K1CO60331 668 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 UBOX5O94941 541 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 H1F0P07305 194 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 ASAH2BP0C7U1 165 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 T-ENOLP0DO92 83 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 IFI30P13284 250 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 HLA-DOBP13765 273 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 RHCEP18577 417 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 FOXG1P55316 489 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 FGD3Q5JSP0 725 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 CARD17Q5XLA6 110 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 C17orf78Q8N4C9 275 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 LRRC17Q8N6Y2 441 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 FAM86B1Q8N7N1 296 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 OR52N5Q8NH56 324 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 ACOT11Q8WXI4 607 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 NRGNQ92686 78 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 ANKRD19PQ9H560 264 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 ESRP2Q9H6T0 727 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 B3GAT2Q9NPZ5 323 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 C20orf141Q9NUB4 165 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 MED29Q9NX70 200 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 POLQO75417 2590 aa16.26■□□□□ 0.19
PRPF40B-216ENST00000552301 FFAR1O14842 300 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 KLF4O43474 513 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 UPK3AO75631 287 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 PDE5AO76074 875 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 ZNF432O94892 652 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 SAGP10523 405 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 SH3BGRP55822 239 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 ROR2Q01974 943 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 LGALS3BPQ08380 585 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 ZP4Q12836 540 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 GABRA6Q16445 453 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 MTX3Q5HYI7 312 aa16.25■□□□□ 0.19
PRPF40B-216ENST00000552301 NRMQ8IXM6 262 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms