RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TIMM23O14925 209 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 BCAS1O75363 584 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 SEC22BO75396 215 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 UPK3AO75631 287 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 AKR7A3O95154 331 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 IGHV2-5P01817 119 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 PRB2P02812 416 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ENO1P06733 434 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 NAT2P11245 290 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 BCKDHAP12694 445 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 CBR1P16152 277 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 NR4A1P22736 598 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 PAX7P23759 505 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 FRKP42685 505 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MAGEA12P43365 314 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 CAPZA2P47755 286 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 CCT3P49368 545 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 EVX1P49640 407 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 CLK1P49759 484 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 SELENOPP49908 381 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 PLTPP55058 493 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 PKNOX1P55347 436 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 SLC35A1P78382 337 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 LCN2P80188 198 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MRPS11P82912 194 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ARF1P84077 181 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 LCP2Q13094 533 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ALKBH6Q3KRA9 238 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 SPDYE7PQ495Y7 208 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ARMCX4Q5H9R4 360 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 PAQR6Q6TCH4 344 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 Q6ZPA2 131 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 GRINAQ7Z429 371 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 GPAT4Q86UL3 456 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MDP1Q86V88 176 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 TMEM99Q8N816 258 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 KIF18AQ8NI77 898 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 FAM110DQ8TAY7 271 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MAGEE2Q8TD90 523 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF764Q96H86 408 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 TSSK3Q96PN8 268 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 GPA33Q99795 319 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ELAC2Q9BQ52 826 aaKnown RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 ERP44Q9BS26 406 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 SERHL2Q9H4I8 314 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 REEP4Q9H6H4 257 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MID1IP1Q9NPA3 183 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 GRHL1Q9NZI5 618 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 BAIAP2L1Q9UHR4 511 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 GPR160Q9UJ42 338 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 KCNE5Q9UJ90 142 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MID2Q9UJV3 735 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 NUP50Q9UKX7 468 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 FAF1Q9UNN5 650 aaPredicted RBP4.57□□□□□ -1.68
HOXB3-213ENST00000552000 TRAPPC4Q9Y296 219 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 MMP24Q9Y5R2 645 aa4.57□□□□□ -1.68
HOXB3-213ENST00000552000 IGHV3OR16-10A0A075B7F0 116 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 TMED7-TICAM2A0A0A6YYA0 188 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 A0A1W2PPW3 197 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 CLDN34H7C241 214 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 CCDC188H7C350 402 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 SCAMP2O15127 329 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 PIN1P1O15428 100 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 FCMRO60667 390 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 TBX19O60806 448 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 CRCPO75575 148 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 RSL1D1O76021 490 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 SEC14L2O76054 403 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 URI1O94763 535 aaPredicted RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 GPANK1O95872 356 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 KRT16P08779 473 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 TCP1P17987 556 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 SDC1P18827 310 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 TAC1P20366 129 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 GATA3P23771 443 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 FKBP2P26885 142 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 ARR3P36575 388 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 PGM1P36871 562 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 RAD52P43351 418 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 MAGEB1P43366 347 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 CCL8P80075 99 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 ROR2Q01974 943 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 PDE7AQ13946 482 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 OR7A5Q15622 319 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 ZNF141Q15928 474 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 GLIPR1L2Q4G1C9 344 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 KLF17Q5JT82 389 aaPredicted RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 GKAP1Q5VSY0 366 aaPredicted RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 SAXO2Q658L1 398 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 OLFML2AQ68BL7 652 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 ASPHD2Q6ICH7 369 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 NIPAL3Q6P499 406 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 C16orf87Q6PH81 154 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 EIF3MQ7L2H7 374 aaKnown RBP4.56□□□□□ -1.68
HOXB3-213ENST00000552000 HMGN2P46Q86SG4 172 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 WDFY1Q8IWB7 410 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 LRRC8AQ8IWT6 810 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 ANKRD42Q8N9B4 389 aa4.56□□□□□ -1.68
HOXB3-213ENST00000552000 DEFB108BQ8NET1 73 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms