RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 ZNF440Q8IYI8 595 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 PIK3C3Q8NEB9 887 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 ST7LQ8TDW4 575 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-220ENST00000551716 TUBB1Q9H4B7 451 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 BEX1Q9HBH7 125 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 HINT3Q9NQE9 182 aaKnown RBP13.04□□□□□ -0.32
CACNB3-220ENST00000551716 DECR2Q9NUI1 292 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 SLCO1C1Q9NYB5 712 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 WIPI2Q9Y4P8 454 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
CACNB3-220ENST00000551716 A0A096LPI6 279 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 RNF103-CHMP3A0A140T963 221 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 TFPTP0C1Z6 253 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 CD79AP11912 226 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 ZNF14P17017 642 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-220ENST00000551716 MAGEB1P43366 347 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 CCL8P80075 99 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 SLC9A3R2Q15599 337 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 CCDC153Q494R4 210 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 FAM209AQ5JX71 171 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 C16orf87Q6PH81 154 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 WDFY1Q8IWB7 410 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 MTHFD2LQ9H903 347 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-220ENST00000551716 SLC7A8Q9UHI5 535 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
CACNB3-220ENST00000551716 CLDN24A6NM45 220 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 AKAP8O43823 692 aaKnown RBP13.02□□□□□ -0.33
CACNB3-220ENST00000551716 GLRA3O75311 464 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 HLA-HP01893 362 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 MT-ND5P03915 603 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 FGF4P08620 206 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 COPZ1P61923 177 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 LCN2P80188 198 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 EPS8Q12929 822 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.33
CACNB3-220ENST00000551716 PTGR1Q14914 329 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 GPAT3Q53EU6 434 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 KANK2Q63ZY3 851 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 RIMKLAQ8IXN7 391 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 GLB1L3Q8NCI6 653 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-220ENST00000551716 OR4F5Q8NH21 305 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 MFSD8Q8NHS3 518 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 UBE2FQ969M7 185 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 OXGR1Q96P68 337 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 GAL3ST1Q99999 423 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 DPY30Q9C005 99 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 PDP1Q9P0J1 537 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-220ENST00000551716 TAAR3PQ9P1P4 343 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 MYEF2Q9P2K5 600 aaKnown RBP13.02□□□□□ -0.33
CACNB3-220ENST00000551716 MID2Q9UJV3 735 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 FZR1Q9UM11 496 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 AUP1Q9Y679 476 aa13.02□□□□□ -0.33
CACNB3-220ENST00000551716 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 TRAF3IP2O43734 574 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 RAB36O95755 333 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 CPA3P15088 417 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 IL7RP16871 459 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 PCGF2P35227 344 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 CCT5P48643 541 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 PLAURQ03405 335 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 SLC3A1Q07837 685 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 PGS1Q32NB8 556 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 WBP2NLQ6ICG8 309 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 RGS7BPQ6MZT1 257 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 C8orf74Q6P047 294 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF627Q7L945 461 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 KRTCAP2Q8N6L1 136 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
CACNB3-220ENST00000551716 TRNT1Q96Q11 434 aaKnown RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 RSPO3Q9BXY4 272 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 MS4A7Q9GZW8 240 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 NUP214P35658 2090 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-220ENST00000551716 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 FRS3O43559 492 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 PEX11AO75192 247 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 AHSA1O95433 338 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 PROCP04070 461 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 CRYBA1P05813 215 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 UQCRC2P22695 453 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 PTDSS1P48651 473 aaKnown RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 KLF3P57682 345 aaPredicted RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 RAB1AP62820 205 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 PIGFQ07326 219 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 IL23RQ5VWK5 629 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 TNFAIP8L2Q6P589 184 aaPredicted RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 SPATC1Q76KD6 591 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms