RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IFFO1Q0D2I5 559 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 PDK3Q15120 406 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ATAD3BQ5T9A4 648 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM225Q6GV28 225 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 OR7E24Q6IFN5 339 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF544Q6NX49 715 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 RNF165Q6ZSG1 346 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CREB3L2Q70SY1 520 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 MDP1Q86V88 176 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 FGFBP3Q8TAT2 258 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC25A43Q8WUT9 341 aaPredicted RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 WDR60Q8WVS4 1066 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 PROX1Q92786 737 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 MAL2Q969L2 176 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 VPS33AQ96AX1 596 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 DDIT4LQ96D03 193 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 NEURL3Q96EH8 262 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 KTI12Q96EK9 354 aaPredicted RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 PAIP2Q9BPZ3 127 aaKnown RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SYT3Q9BQG1 590 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 WFDC6Q9BQY6 131 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 NAA11Q9BSU3 229 aaPredicted RBP5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 EMC6Q9BV81 110 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 C1QTNF5Q9BXJ0 243 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 AMBRA1Q9C0C7 1298 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 CENPHQ9H3R5 247 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 TREM2Q9NZC2 230 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 PCDHGB4Q9UN71 923 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC35A3Q9Y2D2 325 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC9A8Q9Y2E8 581 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 AMDHD2Q9Y303 409 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 HDGFL3Q9Y3E1 203 aa5.91□□□□□ -1.46
PRPF40B-214ENST00000551320 IGHV2OR16-5A0A0B4J2B6 119 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 SHISA3A0PJX4 238 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 AQP7P3A6NL99 342 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 DUXAA6NLW8 204 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 H3BS24 57 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 M0R3G1 203 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 HPXP02790 462 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 BCHEP06276 602 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 CCL2P13500 99 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 IL7RP16871 459 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 CD247P20963 164 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 EPHA3P29320 983 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC1A3P43003 542 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 CRATP43155 626 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC1A6P48664 564 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 ABCE1P61221 599 aaKnown RBP5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 EGR4Q05215 589 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 SNTB2Q13425 540 aaKnown RBP5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 ADRM1Q16186 407 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 CEACAM16Q2WEN9 425 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 GLIPR1L2Q4G1C9 344 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 C1orf140Q5VVS0 124 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 PRAMEF8Q5VWM4 474 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 PRAMEF7Q5VXH5 474 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 PAQR6Q6TCH4 344 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 KLHL24Q6TFL4 600 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 C10orf111Q8N326 155 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 OR8J2Q8NGG1 315 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 OR9I1Q8NGQ6 314 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 OR52P1PQ8NH57 321 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 MIPOL1Q8TD10 442 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 MGARPQ8TDB4 240 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 C22orf15Q8WYQ4 148 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 ARL8AQ96BM9 186 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 MOAP1Q96BY2 351 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 TXNDC15Q96J42 360 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 TSPAN32Q96QS1 320 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 OR52E6Q96RD3 313 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 PANX1Q96RD7 426 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 DOK1Q99704 481 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 KCNS3Q9BQ31 491 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 METTL17Q9H7H0 456 aaPredicted RBP5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 CRLF2Q9HC73 371 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM45AQ9NWC5 275 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEFF2Q9UIK5 374 aaPredicted RBP5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 TRAPPC4Q9Y296 219 aa5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 SPIN1Q9Y657 262 aaPredicted RBP5.9□□□□□ -1.46
PRPF40B-214ENST00000551320 DYSFO75923 2080 aa5.9□□□□□ -1.47
PRPF40B-214ENST00000551320 LOC390937A0A1W2PQ73 354 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 ANKRD34BA5PLL1 514 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 CDHR4A6H8M9 788 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF587BE7ETH6 402 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 E9PBE3 544 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 SDHDO14521 159 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 TPST1O60507 370 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 CDC14BO60729 498 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 NCR1O76036 304 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 WNT11O96014 354 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 AK1P00568 194 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 CRYAAP02489 173 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 GPIP06744 558 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 PNMTP11086 282 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 NAT2P11245 290 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 CD79AP11912 226 aa5.89□□□□□ -1.47
PRPF40B-214ENST00000551320 IFNGR1P15260 489 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms