RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CCDC126Q96EE4 140 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 KTI12Q96EK9 354 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 C14orf79Q96F83 325 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PGM2Q96G03 612 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 METTL2AQ96IZ6 378 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 MAELQ96JY0 434 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 COL21A1Q96P44 957 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PIGQQ9BRB3 760 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CENPKQ9BS16 269 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ROPN1BQ9BZX4 212 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 WDR41Q9HAD4 459 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ROPN1Q9HAT0 212 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 RRAGDQ9NQL2 400 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 ACSS1Q9NUB1 689 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 FAM120CQ9NX05 1096 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 BCAP29Q9UHQ4 241 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 PCDHGB3Q9Y5G1 929 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 SPACA6W5XKT8 324 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 USF3Q68DE3 2245 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 CMYA5Q8N3K9 4069 aa4.31□□□□□ -1.72
SCAF11-214ENST00000550893 SONP18583 2426 aaKnown RBP4.31□□□□□ -1.72
SCAF11-214ENST00000550893 OR2M5A3KFT3 312 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 DEFB108AA8MXU0 73 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 BCKDKO14874 412 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SCO2O43819 266 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 WDR1O75083 606 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 PEX11AO75192 247 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 AQP8O94778 261 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 UTS2O95399 124 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 H6PDO95479 791 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 C6orf47O95873 294 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SERPINE1P05121 402 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 PRSS2P07478 247 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 UQCRHP07919 91 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 NEFHP12036 1026 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 TCEA1P23193 301 aaKnown RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SRD5A2P31213 254 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 TIMP3P35625 211 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 PLGLB1Q02325 96 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF117Q03924 483 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 RBPJQ06330 500 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SNTA1Q13424 505 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 HEPACAMQ14CZ8 416 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 CHI3L2Q15782 390 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 GTDC1Q4AE62 458 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SLC9B1Q4ZJI4 515 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 IL23RQ5VWK5 629 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 TMEM198Q66K66 360 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 OR4F3Q6IEY1 312 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SLC30A6Q6NXT4 461 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 B3GNT6Q6ZMB0 384 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MEX3BQ6ZN04 569 aaKnown RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MARCH3Q86UD3 253 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 PLCZ1Q86YW0 608 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 TAGAPQ8N103 731 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 OR5D16Q8NGK9 328 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 OR9I1Q8NGQ6 314 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 OR5AK3PQ8NH89 298 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 CDS1Q92903 461 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 VPS33AQ96AX1 596 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 RMND5BQ96G75 393 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MS4A4EQ96PG1 132 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 OR52B2Q96RD2 323 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 INPP5KQ9BT40 448 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 FAIM2Q9BWQ8 316 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SRXN1Q9BYN0 137 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 DSN1Q9H410 356 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF385DQ9H6B1 395 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MEAF6Q9HAF1 191 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 TMBIM4Q9HC24 238 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 EQTNQ9NQ60 294 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 AHSPQ9NZD4 102 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MED11Q9P086 117 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 ICAM5Q9UMF0 924 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 BOKQ9UMX3 212 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 ABCG2Q9UNQ0 655 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 STK38LQ9Y2H1 464 aa4.3□□□□□ -1.72
SCAF11-214ENST00000550893 MRPS18CQ9Y3D5 142 aaKnown RBP4.3□□□□□ -1.72
SCAF11-214ENST00000550893 CSPG4Q6UVK1 2322 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 DSPPQ9NZW4 1301 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 C15orf38-AP3S2A0A0A6YYH1 394 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 A0A0J9YW62 118 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 A0A1W2PNV4 684 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 TMEM120BA0PK00 339 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CLDN24A6NM45 220 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 H3BQF6 201 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SLC28A1O00337 649 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 BIRC5O15392 142 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 KIAA0513O60268 411 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 FCMRO60667 390 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SEC22BO75396 215 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CTAG2O75638 210 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SOX30O94993 753 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SNX4O95219 450 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ANGPTL1O95841 491 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 HMGN2P05204 90 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms