RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PUDPQ08623 228 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 FAM27E3Q08E93 113 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 HIST2H2BCQ6DN03 193 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 MEX3BQ6ZN04 569 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 AAED1Q7RTV5 226 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 UEVLDQ8IX04 471 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 TMEM45BQ96B21 275 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 B3GAT1Q9P2W7 334 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 PRSS50Q9UI38 385 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 TCRBV3S1A0A5B6 114 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 EFCAB9A8MZ26 197 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 SERPINI2O75830 405 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 CIB2O75838 187 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 IGHV3-9P01782 118 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 SAGP10523 405 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 MAKP20794 623 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 CLDN17P56750 224 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 SNTB1Q13884 538 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 C1orf146Q5VVC0 180 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 MEX3DQ86XN8 651 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 UBE2J2Q8N2K1 259 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 OR4K5Q8NGD3 323 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 LIPHQ8WWY8 451 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 CHID1Q9BWS9 393 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 ENKD1Q9H0I2 346 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 TAS2R5Q9NYW4 299 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 TMCC3Q9ULS5 477 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 NOX1Q9Y5S8 564 aa14.37□□□□□ -0.11
CHMP1A-209ENST00000550872 ITPR2Q14571 2701 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 TNFRSF11BO00300 401 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 RNF13O43567 381 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 KRT36O76013 467 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 HLA-DOBP13765 273 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 COX6B1P14854 86 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 GPR4P46093 362 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 POU3F1Q03052 451 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 ZP4Q12836 540 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 SEC23BQ15437 767 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 FBXW9Q5XUX1 488 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 OR2T5Q6IEZ7 315 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 NIPAL3Q6P499 406 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 PXKQ7Z7A4 578 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 DMRTC2Q8IXT2 367 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 OR2T29Q8NH02 315 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 RSRC1Q96IZ7 334 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 ALPK1Q96QP1 1244 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 SPOCK3Q9BQ16 436 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 FUZQ9BT04 418 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 KRCC1Q9NPI7 259 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 UPB1Q9UBR1 384 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 TMEM5Q9Y2B1 443 aa14.36□□□□□ -0.11
CHMP1A-209ENST00000550872 SH3PXD2BA1X283 911 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 C16orf97H3BN30 126 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 TRAF3IP2O43734 574 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 AKAP8O43823 692 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 ADAP00813 363 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 IGFBP2P18065 325 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 PEX19P40855 299 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 AQP2P41181 271 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 PCYT1AP49585 367 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 SELENOPP49908 381 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 SORDQ00796 357 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 LAPTM4AQ15012 233 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 Q6ZT83 130 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 TMPRSS11FQ6ZWK6 438 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 GABRG1Q8N1C3 465 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 ANKK1Q8NFD2 765 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 OR51A7Q8NH64 312 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 UTP4Q969X6 686 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 FAM46AQ96IP4 442 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 TXNDC15Q96J42 360 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 YY1AP1Q9H869 796 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 SLC7A10Q9NS82 523 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 RCE1Q9Y256 329 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 LYVE1Q9Y5Y7 322 aa14.35□□□□□ -0.11
CHMP1A-209ENST00000550872 TUBAL3A6NHL2 446 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 ZNF726A6NNF4 738 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 OR10H3O60404 316 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 CNOT4O95628 575 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 CST1P01037 141 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 UGT2B10P36537 528 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 SLC9A3P48764 834 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 HMGA2P52926 109 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 GABPB1Q06547 395 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 RPL18Q07020 188 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 FAPQ12884 760 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 PPP1R8Q12972 351 aaKnown RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 P2RY6Q15077 328 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 NHLRC1Q6VVB1 395 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 STAC2Q6ZMT1 411 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 SLC35D2Q76EJ3 337 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 OAFQ86UD1 273 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 CXorf67Q86X51 503 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 POMGNT2Q8NAT1 580 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 ACBD4Q8NC06 268 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 MOSPD2Q8NHP6 518 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
CHMP1A-209ENST00000550872 TNFRSF13CQ96RJ3 184 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms