RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 CEACAM20Q6UY09 585 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GLDNQ6ZMI3 551 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 C17orf107Q6ZR85 190 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FAM83HQ6ZRV2 1179 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 SMIM5Q71RC9 77 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FAM122BQ7Z309 247 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TRMT11Q7Z4G4 463 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 PXKQ7Z7A4 578 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 NR2C2APQ86WQ0 139 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GID4Q8IVV7 300 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SIAH3Q8IW03 269 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FAM217AQ8IXS0 508 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 YAF2Q8IY57 180 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 KLHDC8AQ8IYD2 350 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PIANPQ8IYJ0 282 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GPC2Q8N158 579 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 NAGSQ8N159 534 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 THEM5Q8N1Q8 247 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 C10orf111Q8N326 155 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TCEANCQ8N8B7 351 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SAMD12Q8N8I0 201 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ARL14EPQ8N8R7 260 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 OR6C4Q8NGE1 309 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OR9Q2Q8NGE9 314 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OR52J3Q8NH60 311 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OR1S1Q8NH92 325 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RAET1EQ8TD07 263 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SLC2A12Q8TD20 617 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SFT2D1Q8WV19 159 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SMIM4Q8WVI0 70 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 APOBEC4Q8WW27 367 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 CNOT9Q92600 299 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 OSTF1Q92882 214 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FGF11Q92914 225 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TMEM203Q969S6 136 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PSMG2Q969U7 264 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MRPS24Q96EL2 167 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 APOLD1Q96LR9 279 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TSNAXQ99598 290 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 COPS8Q99627 209 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FUZQ9BT04 418 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 LDHAL6BQ9BYZ2 381 aaPredicted RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 TM6SF2Q9BZW4 377 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ARL6Q9H0F7 186 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 C20orf85Q9H1P6 137 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SLC38A1Q9H2H9 487 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ANKRD19PQ9H560 264 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 REEP4Q9H6H4 257 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 OPA3Q9H6K4 179 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 EVA1AQ9H8M9 152 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RNF122Q9H9V4 155 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 GSN-AS1Q9NRJ2 163 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ZFP57Q9NU63 452 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ELOVL2Q9NXB9 296 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ARL15Q9NXU5 204 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 RASL12Q9NYN1 266 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TAS2R8Q9NYW2 309 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TAS2R3Q9NYW6 316 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 COQ3Q9NZJ6 369 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 MYEF2Q9P2K5 600 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 TINAGQ9UJW2 476 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 FBXL2Q9UKC9 423 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SCML2Q9UQR0 700 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 SLC9A8Q9Y2E8 581 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 PLEKHA6Q9Y2H5 1048 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 CARHSP1Q9Y2V2 147 aaKnown RBP3□□□□□ -1.93
CCNT1-203ENST00000550457 SNX10Q9Y5X0 201 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 ANK1P16157 1881 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 TSC2P49815 1807 aa3□□□□□ -1.93
CCNT1-203ENST00000550457 UBR3Q6ZT12 1888 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 LOC105369274A0A096LPK9 316 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 A0A0B4J203 849 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 TRBV5-4A0A0C4DH59 114 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 TRBV4-1A0A0J9YWV2 114 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 CXorf51AA0A1B0GTR3 108 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 TMEM218A2RU14 115 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 MYBPHLA2RUH7 354 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 ARGFXA6NJG6 315 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 ANXA2P2A6NMY6 339 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF729A6NN14 1252 aaPredicted RBP2.99□□□□□ -1.93
CCNT1-203ENST00000550457 GABRR3A8MPY1 467 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 G3V3Q6 166 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 GABARAPH6UMI1 98 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 FOXE1O00358 373 aaPredicted RBP2.99□□□□□ -1.93
CCNT1-203ENST00000550457 UBE2CO00762 179 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 ZNF197O14709 1029 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 MID1O15344 667 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 SGCEO43556 437 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 RNF13O43567 381 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 HCRTO43612 131 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 PLPP2O43688 288 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 KDELR3O43731 214 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 LANCL1O43813 399 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 DNAJB6O75190 326 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 NME6O75414 186 aaPredicted RBP2.99□□□□□ -1.93
CCNT1-203ENST00000550457 CLDN11O75508 207 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 POP7O75817 140 aaKnown RBP2.99□□□□□ -1.93
CCNT1-203ENST00000550457 GATBO75879 557 aaKnown RBP2.99□□□□□ -1.93
CCNT1-203ENST00000550457 KRT33AO76009 404 aa2.99□□□□□ -1.93
CCNT1-203ENST00000550457 LRATO95237 230 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms