RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DEFB119Q8N690 84 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF283Q8N7M2 679 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 OR6M1Q8NGM8 313 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 JSRP1Q96MG2 331 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ELF4Q99607 663 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SDHCQ99643 169 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 VRK1Q99986 396 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ZBP1Q9H171 429 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 C20orf141Q9NUB4 165 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 KLRF1Q9NZS2 232 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 EMC3Q9P0I2 261 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 BRWD1Q9NSI6 2320 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CDC42EP2O14613 210 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ERCC1P07992 297 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ACSM4P0C7M7 580 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 PET100P0DJ07 73 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF28P17035 718 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 HHEXQ03014 270 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CLLU1Q5K131 121 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 C9orf62Q8N4C0 152 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 OR1J4Q8NGS1 313 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC2A12Q8TD20 617 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ST8SIA2Q92186 375 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 FGF13Q92913 245 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 TGM7Q96PF1 710 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 C1QTNF6Q9BXI9 259 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 C11orf49Q9H6J7 331 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CDC14CA4D256 554 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 UBL4AP11441 157 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 PGCP20142 388 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 NTSR1P30989 418 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 MMP15P51511 669 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 RAB2AP61019 212 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SMAD2Q15796 467 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 LINC00303Q3SY05 128 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 OTPQ5XKR4 325 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 PXKQ7Z7A4 578 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 LRRC46Q96FV0 321 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 MICU1Q9BPX6 476 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ERVMER34-1Q9H9K5 563 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 LSM2Q9Y333 95 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF638Q14966 1978 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 A0A0D9SG52 128 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 AIPO00170 330 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SULT1B1O43704 296 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ANK1P16157 1881 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 MAOBP27338 520 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 MAGEB1P43366 347 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 TM4SF4P48230 202 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 DPTQ07507 201 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ARHGAP11BQ3KRB8 267 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CARD17Q5XLA6 110 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 TMEM215Q68D42 235 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 FOXRED1Q96CU9 486 aaPredicted RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 RNF170Q96K19 258 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC6A20Q9NP91 592 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 DLL4Q9NR61 685 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 POMT2Q9UKY4 750 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 HHLA2Q9UM44 414 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 DAPP1Q9UN19 280 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 HCFC2Q9Y5Z7 792 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 A0A0A6YYD5 115 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 C17orf105B2RV13 164 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 SYT7O43581 403 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 THBS1P07996 1170 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 TPT1P13693 172 aaKnown RBP9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 ADH6P28332 368 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 MAT1AQ00266 395 aaKnown RBP9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 DUSP8Q13202 625 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 GPNMBQ14956 572 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 TMEM52BQ4KMG9 183 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 TMEM31Q5JXX7 168 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 FAM74A1Q5RGS3 127 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 CD300LDQ6UXZ3 194 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF547Q8IVP9 402 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 SVBPQ8N300 66 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 IL17RCQ8NAC3 791 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 PHYHIPQ92561 330 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 FAM3DQ96BQ1 224 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 PRRT1Q99946 306 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 PPP1R3EQ9H7J1 279 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 RP1P56715 2156 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 A0A0B4J2A0 478 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 CD53P19397 219 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 NR0B1P51843 470 aaKnown RBP9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 TNK1Q13470 666 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF77Q15935 545 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 FAM78AQ5JUQ0 283 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 DPY19L2P2Q6ZN68 376 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 C12orf40Q86WS4 652 aa9.4□□□□□ -0.9
SMARCC2-209ENST00000550164 MORN4Q8NDC4 146 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms