RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MRGPRX4Q96LA9 322 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 GFM1Q96RP9 751 aaKnown RBP9.03□□□□□ -0.96
RAB5B-206ENST00000549505 B3GNT4Q9C0J1 378 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 SLC7A5P2Q9GIP4 190 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
RAB5B-206ENST00000549505 TAS2R10Q9NYW0 307 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 TRBV5-5A0A0J9YX44 114 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 A8MUA0 341 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 MEN1O00255 615 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 APOL3O95236 402 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 CLEC2LP0C7M8 214 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 GBX2P52951 348 aaPredicted RBP9.03□□□□□ -0.96
RAB5B-206ENST00000549505 EXT1Q16394 746 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 C1orf140Q5VVS0 124 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 MARCH9Q86YJ5 346 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 EID2Q8N6I1 236 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 FAM98AQ8NCA5 519 aaKnown RBP9.03□□□□□ -0.96
RAB5B-206ENST00000549505 TXNDC15Q96J42 360 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 ALG12Q9BV10 488 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 CYSLTR2Q9NS75 346 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 MYOTQ9UBF9 498 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 GRIP1Q9Y3R0 1128 aa9.03□□□□□ -0.96
RAB5B-206ENST00000549505 IGHV1-45A0A0A0MS14 117 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 TEX13CA0A0J9YWL9 993 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 CDK2AP1O14519 115 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 SUSD5O60279 629 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 ZNF354AO60765 605 aaPredicted RBP9.02□□□□□ -0.96
RAB5B-206ENST00000549505 UPK3AO75631 287 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 CXCR1P25024 350 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 RPL27P61353 136 aaKnown RBP9.02□□□□□ -0.96
RAB5B-206ENST00000549505 TOMM34Q15785 309 aaPredicted RBP9.02□□□□□ -0.96
RAB5B-206ENST00000549505 YIF1BQ5BJH7 314 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 LCN10Q6JVE6 187 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 PAPD4Q6PIY7 484 aaKnown RBP9.02□□□□□ -0.96
RAB5B-206ENST00000549505 NR2C2APQ86WQ0 139 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 LAX1Q8IWV1 398 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 AGBL5Q8NDL9 886 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 OR10H4Q8NGA5 316 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 ZPLD1Q8TCW7 415 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 METTL21AQ8WXB1 218 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 THRSPQ92748 146 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 MAP6Q96JE9 813 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 ZPBPQ9BS86 351 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 MRI1Q9BV20 369 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 ABCB9Q9NP78 766 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 EXOSC4Q9NPD3 245 aaKnown RBP9.02□□□□□ -0.96
RAB5B-206ENST00000549505 SDHAF3Q9NRP4 125 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 CEP290O15078 2479 aa9.02□□□□□ -0.96
RAB5B-206ENST00000549505 A0A087WZY1 265 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 IGLV1-36A0A0B4J1U3 117 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CENPBD1B2RD01 187 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 HCRTR2O43614 444 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 KLF7O75840 302 aaPredicted RBP9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ATP6V1E1P36543 226 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 MNDAP41218 407 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 OR12D2P58182 307 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ARPC4P59998 168 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ERVK-25P63136 954 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 E2F1Q01094 437 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 H3F3CQ6NXT2 135 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 SLC22A16Q86VW1 577 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 LSM14AQ8ND56 463 aaKnown RBP9.02□□□□□ -0.97
RAB5B-206ENST00000549505 FAM83FQ8NEG4 500 aaPredicted RBP9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ASB17Q8WXJ9 295 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 PIGKQ92643 395 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 Q96M85 177 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 KCNS3Q9BQ31 491 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 OR51V1Q9H2C8 321 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ZNF275Q9NSD4 429 aaPredicted RBP9.02□□□□□ -0.97
RAB5B-206ENST00000549505 OCIAD1Q9NX40 245 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 COPS3Q9UNS2 423 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CPED1A4D0V7 1026 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 A6NIZ1 184 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ZNF432O94892 652 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 UMODP07911 640 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 TRAPPC2P0DI81 140 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 TRAPPC2BP0DI82 140 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ALOX5APP20292 161 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CCR9P51686 369 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 DEFA1P59665 94 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 DEFA3P59666 94 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CTXN1P60606 82 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 RAP1BP61224 184 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 RAP1AP62834 184 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 COL28A1Q2UY09 1125 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 KLHL12Q53G59 568 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 GDPD3Q7L5L3 318 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 TMEM105Q8N8V8 129 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 SYT14Q8NB59 555 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 CYB561A3Q8NBI2 242 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 ZNF563Q8TA94 476 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 SLC22A8Q8TCC7 542 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 RASD2Q96D21 266 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 GAL3ST4Q96RP7 486 aa9.02□□□□□ -0.97
RAB5B-206ENST00000549505 TPK1Q9H3S4 243 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms