RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 OR6C65A6NJZ3 312 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 FAAHO00519 579 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 AIM2O14862 343 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 ATP6V1G2O95670 118 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 MSMBP08118 114 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 MATN1P21941 496 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 MAPK1P28482 360 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 THBS4P35443 961 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 HBA1P69905 142 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 ADRM1Q16186 407 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 AWAT1Q58HT5 328 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 TYW3Q6IPR3 259 aaKnown RBP11.69□□□□□ -0.54
CDX2-202ENST00000548877 VHLLQ6RSH7 139 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 RIMKLAQ8IXN7 391 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 SVOPLQ8N434 492 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 FNDC5Q8NAU1 212 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 ZNF385AQ96PM9 386 aaKnown RBP11.69□□□□□ -0.54
CDX2-202ENST00000548877 ZBTB18Q99592 522 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 GID8Q9NWU2 228 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 ASIC5Q9NY37 505 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 OSGIN1Q9UJX0 560 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
CDX2-202ENST00000548877 AQP7P3A6NL99 342 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 ANGPT2O15123 496 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 PEX11AO75192 247 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 AGR2O95994 175 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 NPPAP01160 153 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 TFP02787 698 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 CBR1P16152 277 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 CDH2P19022 906 aaPredicted RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 EVX1P49640 407 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 POLR2HP52434 150 aaKnown RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 KCNJ10P78508 379 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 CCNIQ14094 377 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 C6orf136Q5SQH8 315 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 DEFB107AQ8IZN7 70 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 GLB1L3Q8NCI6 653 aaPredicted RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 CLDND2Q8NHS1 167 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 RCN3Q96D15 328 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 DNAJA3Q96EY1 480 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 AURKBQ96GD4 344 aaPredicted RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 PRPF18Q99633 342 aaKnown RBP11.68□□□□□ -0.54
CDX2-202ENST00000548877 ZNF747Q9BV97 191 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 LINC00470Q9BZP3 86 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 EXD2Q9NVH0 621 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 USP22Q9UPT9 525 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 GPR45Q9Y5Y3 372 aa11.68□□□□□ -0.54
CDX2-202ENST00000548877 TMEM72A0PK05 275 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 TMPRSS2O15393 492 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 SLC22A3O75751 556 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 LGI1O95970 557 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 ALDOCP09972 364 aaKnown RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 PRPS1L1P21108 318 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 RYKP34925 604 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 IDH2P48735 452 aaKnown RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 P2RY4P51582 365 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 SH3BGRP55822 239 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 RPS26P62854 115 aaKnown RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 PTGR1Q14914 329 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 ELFN2Q5R3F8 820 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 OTUD3Q5T2D3 398 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 C1orf229Q6ZS94 237 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 LINGO2Q7L985 606 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 OLIG3Q7RTU3 272 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 TMEM99Q8N816 258 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 IL17RDQ8NFM7 739 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 OR5AK3PQ8NH89 298 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 ZG16BQ96DA0 208 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 HOPXQ9BPY8 73 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 DENND2DQ9H6A0 471 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.67□□□□□ -0.54
CDX2-202ENST00000548877 CCDC167Q9P0B6 97 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
CDX2-202ENST00000548877 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 ZC3H12DA2A288 527 aaKnown RBP11.66□□□□□ -0.54
CDX2-202ENST00000548877 TMEM229AB2RXF0 380 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 LYNX1G3V0Z9 82 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 RPL36A-HNRNPH2H7BZ11 118 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 NR5A2O00482 541 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 MRASO14807 208 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 FKBP6O75344 327 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 VAMP5O95183 116 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 GPIP06744 558 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 ADRA2AP08913 450 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 LYNX1P0DP58 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms