RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SERINC1Q9NRX5 453 aa15.58■□□□□ 0.08
HDAC7-227ENST00000548080 SCOCQ9UIL1 159 aa15.58■□□□□ 0.08
HDAC7-227ENST00000548080 ARHGAP21Q5T5U3 1957 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 FIGNL2A6NMB9 653 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 E9PLN8 166 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 WBP4O75554 376 aaKnown RBP15.57■□□□□ 0.08
HDAC7-227ENST00000548080 SMNDC1O75940 238 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■■□□□ 12.6
HDAC7-227ENST00000548080 NDUFB2O95178 105 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 AHSA1O95433 338 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 MT-ATP6P00846 226 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 BGLAPP02818 100 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 HMGN1P05114 100 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 CCDC159P0C7I6 412 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 FMO3P31513 532 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 RPS5P46782 204 aaKnown RBP15.57■□□□□ 0.08
HDAC7-227ENST00000548080 PCYT1AP49585 367 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 CLDN18P56856 261 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 PMPCAQ10713 525 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 SNAPC1Q16533 368 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 TMEM44Q2T9K0 475 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 PGGHGQ32M88 737 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 ANKDD1AQ495B1 522 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 C1orf185Q5T7R7 199 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 ATP6V1C2Q8NEY4 427 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 OR8J1Q8NGP2 316 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 OR6S1Q8NH40 331 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 SSC4DQ8WTU2 575 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 DDIT4LQ96D03 193 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 MOGAT1Q96PD6 335 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 SLC38A2Q96QD8 506 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 VKORC1Q9BQB6 163 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 POLDIP3Q9BY77 421 aaKnown RBP15.57■□□□□ 0.08
HDAC7-227ENST00000548080 ENKD1Q9H0I2 346 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 FKRPQ9H9S5 495 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 NANSQ9NR45 359 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 IL20RAQ9UHF4 553 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 ZNF229Q9UJW7 825 aa15.57■□□□□ 0.08
HDAC7-227ENST00000548080 SPIN1Q9Y657 262 aaPredicted RBP15.57■□□□□ 0.08
HDAC7-227ENST00000548080 MPDZO75970 2070 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 NCOA6Q14686 2063 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-227ENST00000548080 A1L4Q6 167 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 M0R129 80 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 SLC1A7O00341 560 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 OR2T1O43869 369 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 EFNA2O43921 213 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 HIST1H2ABP04908 130 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 SLC6A6P31641 620 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 SUCLG1P53597 346 aaKnown RBP15.56■□□□□ 0.08
HDAC7-227ENST00000548080 CLDN15P56746 228 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 CSNK2BP67870 215 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 ACSF3Q4G176 576 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-227ENST00000548080 FAM69AQ5T7M9 428 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 TMEM154Q6P9G4 183 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 THSD4Q6ZMP0 1018 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 HIST3H2AQ7L7L0 130 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 CCDC103Q8IW40 242 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 GTPBP8Q8N3Z3 284 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-227ENST00000548080 TCEANCQ8N8B7 351 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 BPIFB6Q8NFQ5 453 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 HIST1H2ACQ93077 130 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 ZNF566Q969W8 418 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 IL4I1Q96RQ9 567 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 TRIB1Q96RU8 372 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 PTDSS2Q9BVG9 487 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 IFT27Q9BW83 186 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 POTEKPQ9BYX7 375 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 OR11A1Q9GZK7 315 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 CLN6Q9NWW5 311 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 BLOC1S6Q9UL45 172 aa15.56■□□□□ 0.08
HDAC7-227ENST00000548080 SPTAN1Q13813 2472 aaKnown RBP15.56■□□□□ 0.08
HDAC7-227ENST00000548080 TRIM64A6NGJ6 449 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 BHLHE40O14503 412 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 PRKYO43930 277 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 WDR1O75083 606 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 ASAH2BP0C7U1 165 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 ZNF708P17019 499 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 CRHBPP24387 322 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 SHC1P29353 583 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 GRK5P34947 590 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 PER3P56645 1201 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 PRPS1P60891 318 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 RPS4XP62701 263 aaKnown RBP15.55■□□□□ 0.08
HDAC7-227ENST00000548080 EFNB1P98172 346 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 BLMHQ13867 455 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 CDSNQ15517 529 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 GLYR1Q49A26 553 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-227ENST00000548080 B3GNT6Q6ZMB0 384 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 SEM1Q6ZVN7 128 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 MAMDC2Q7Z304 686 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-227ENST00000548080 PM20D2Q8IYS1 436 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 LNX2Q8N448 690 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 TSPAN14Q8NG11 270 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 TTYH2Q9BSA4 534 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 SCN3BQ9NY72 215 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 BAIAP2Q9UQB8 552 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 TPRKBQ9Y3C4 175 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 SPTBN1Q01082 2364 aaKnown RBP15.55■□□□□ 0.08
HDAC7-227ENST00000548080 DOPEY1Q5JWR5 2465 aa15.55■□□□□ 0.08
HDAC7-227ENST00000548080 TLX2O43763 284 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-227ENST00000548080 GLI4P10075 376 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms