RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 EMP2P54851 167 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 CLDN12P56749 244 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 KRR1Q13601 381 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 AGAP7PQ5VUJ5 663 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 HIST3H2AQ7L7L0 130 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 DPY19L4Q7Z388 723 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 IZUMO1Q8IYV9 350 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 OR4M2Q8NGB6 313 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 OR6N2Q8NGY6 317 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 HIST1H2ACQ93077 130 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 LAT2Q9GZY6 243 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 HOXD1Q9GZZ0 328 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 ISYNA1Q9NPH2 558 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 MRPS7Q9Y2R9 242 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 BOD1L1Q8NFC6 3051 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 TMED7-TICAM2A0A0A6YYA0 188 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ALG1L2C9J202 215 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 OR2J2O76002 312 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 AKR7A3O95154 331 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 EIF4EP06730 217 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 GP1BBP13224 206 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 GALNSP34059 522 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 RAB25P57735 213 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ADGRG3Q86Y34 549 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 LRRC75AQ8NAA5 344 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 METTL21AQ8WXB1 218 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 PPP1R14AQ96A00 147 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 TAS2R5Q9NYW4 299 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 MRTO4Q9UKD2 239 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 IKZF2Q9UKS7 526 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 GTF2A1LQ9UNN4 478 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 BAIAP2Q9UQB8 552 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 HIF3AQ9Y2N7 669 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 RBMX2Q9Y388 322 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 TMED7Q9Y3B3 224 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ZFHX4Q86UP3 3567 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 TMEM200CA6NKL6 621 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 LANCL1O43813 399 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 FADS1O60427 444 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 MPZL1O95297 269 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 PRPS1P60891 318 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 SIRPAP78324 504 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 DCDP81605 110 aaKnown RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 PRAMEF20Q5VT98 475 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 DMKNQ6E0U4 476 aaPredicted RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 ASB18Q6ZVZ8 466 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 MDGA2Q7Z553 956 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 PPP1R3BQ86XI6 285 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ZNF440Q8IYI8 595 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 Q8N402 240 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ZNF433Q8N7K0 673 aaPredicted RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 OR10G3Q8NGC4 313 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 THEM6Q8WUY1 208 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 WDR77Q9BQA1 342 aaPredicted RBP10.04□□□□□ -0.8
CUX1-212ENST00000547394 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 BEX2Q9BXY8 128 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 ISPDA4D126 451 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 PLPP2O43688 288 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 WNT11O96014 354 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 UQCRC1P31930 480 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 DEFA1P59665 94 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 DEFA3P59666 94 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ACSM1Q08AH1 577 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 UBALD2Q8IYN6 164 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ZNF441Q8N8Z8 693 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 OR10AC1Q8NH08 325 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ZNF417Q8TAU3 575 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 DERL3Q96Q80 235 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ZNF587Q96SQ5 575 aaPredicted RBP10.03□□□□□ -0.8
CUX1-212ENST00000547394 SPSB2Q99619 263 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 MED18Q9BUE0 208 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ENAMQ9NRM1 1142 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 RXFP3Q9NSD7 469 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 KLRF1Q9NZS2 232 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 SEMA5BQ9P283 1151 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 EXTL2Q9UBQ6 330 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 MEN1O00255 615 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ADAM10O14672 748 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 PRKCAP17252 672 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 SDHAP31040 664 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ADH7P40394 386 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ACY1Q03154 408 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ACKR1Q16570 336 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 OR4M1Q8NGD0 313 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 ADAD1Q96M93 576 aaKnown RBP10.03□□□□□ -0.8
CUX1-212ENST00000547394 WACQ9BTA9 647 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 DUSP23Q9BVJ7 150 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 NMNAT2Q9BZQ4 307 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 KCNG2Q9UJ96 466 aa10.03□□□□□ -0.8
CUX1-212ENST00000547394 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms