RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TRAV36DV7A0A075B6V5 113 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TRBV4-1A0A0J9YWV2 114 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 A0A1W2PRQ8 180 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 CD8B2A6NJW9 211 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 LIPT2A6NK58 231 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ENO4A6NNW6 628 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 AHRRA9YTQ3 701 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 KDM4EB2RXH2 506 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 E9PLN8 166 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 J3QKU1 62 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 SULT2B1O00204 365 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 SMAD9O15198 467 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 DNPH1O43598 174 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PIP5K1CO60331 668 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 FZD7O75084 574 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 SYNGR4O95473 234 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PMS2P2O95744 297 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PLA2G1BP04054 148 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 H1F0P07305 194 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 HOXD4P09016 255 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 UMPSP11172 480 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 NQO1P15559 274 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 GTF2E2P29084 291 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 RPS5P46782 204 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 CLK1P49759 484 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 UGT2B15P54855 530 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 RAC3P60763 192 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ACTR3P61158 418 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 EGR4Q05215 589 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 CCNIQ14094 377 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 DGCR6Q14129 220 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 KPNB1Q14974 876 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TRAM2Q15035 370 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 OR7A5Q15622 319 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 SGCBQ16585 318 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 EIF2S3LQ2VIR3 472 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 IQCCQ4KMZ1 466 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 FAM69AQ5T7M9 428 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ABLIM2Q6H8Q1 611 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 RTL6Q6ICC9 239 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PLXDC2Q6UX71 529 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TMPPEQ6ZT21 453 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 NCCRP1Q6ZVX7 275 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PIWIL3Q7Z3Z3 882 aaKnown RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 P4HA3Q7Z4N8 544 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 FJX1Q86VR8 437 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 P3H2Q8IVL5 708 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 NKAIN4Q8IVV8 208 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MARVELD2Q8N4S9 558 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 C9orf106Q8NAJ2 232 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PFN4Q8NHR9 129 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 RNF128Q8TEB7 428 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM255BQ8WV15 326 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM239Q8WW34 195 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ACOT11Q8WXI4 607 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ZHX1-C8orf76Q96EF9 292 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 KTI12Q96EK9 354 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 DMRTA2Q96SC8 542 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 VKORC1Q9BQB6 163 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 PRSS27Q9BQR3 290 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TTYH2Q9BSA4 534 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TAPBPLQ9BX59 468 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 POTEKPQ9BYX7 375 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 ANKRD19PQ9H560 264 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 NMNAT1Q9HAN9 279 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TIGARQ9NQ88 270 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 MEMO1Q9Y316 297 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 TESMINQ9Y4I5 508 aa5.65□□□□□ -1.5
PRKDC-211ENST00000546304 BAHCC1Q9P281 2608 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 HECTD1Q9ULT8 2610 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 IGHV3-15A0A0B4J1V0 119 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 A0A1B0GUH1 482 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 FTCDNL1E5RQL4 147 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 LRRN3E7EW58 273 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 CCL21O00585 134 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 LRRTM2O43300 516 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 OR2T1O43869 369 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 EIF1BO60739 113 aaKnown RBP5.64□□□□□ -1.51
PRKDC-211ENST00000546304 FKBP6O75344 327 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 AQP8O94778 261 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 TGM6O95932 706 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 MT-ATP6P00846 226 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 IGF2P01344 180 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 KLK2P20151 261 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 ENPP1P22413 925 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 RRM2P31350 389 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 PER3P56645 1201 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 CARD18P57730 90 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 NUP107P57740 925 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 OR2B6P58173 313 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 SMIM11AP58511 58 aa5.64□□□□□ -1.51
PRKDC-211ENST00000546304 SLC35A1P78382 337 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms