RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 A0A0G2JPF8 293 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HNRNPCL2B2RXH8 293 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HNRNPCL3B7ZW38 293 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 LYNX1G3V0Z9 82 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HDAC3O15379 428 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HNRNPCL1O60812 293 aaKnown RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 SEC14L2O76054 403 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 AHSA1O95433 338 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 IL6P05231 212 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HNRNPCL4P0DMR1 293 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 LYNX1P0DP58 116 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HLA-DOBP13765 273 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF14P17017 642 aaPredicted RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 ITGA2P17301 1181 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 NPR2P20594 1047 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 HNF1AP20823 631 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 RPS5P46782 204 aaKnown RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 SQLEQ14534 574 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 CARTPTQ16568 116 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 SLC9B1Q4ZJI4 515 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 DEF8Q6ZN54 512 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 RFLNBQ8N5W9 214 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 LSMEM1Q8N8F7 131 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF540Q8NDQ6 660 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 NEU4Q8WWR8 484 aaPredicted RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 GTF2H4Q92759 462 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 MAL2Q969L2 176 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 OXGR1Q96P68 337 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 SNX18Q96RF0 628 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 WFDC6Q9BQY6 131 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 MRPL37Q9BZE1 423 aaKnown RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 RAB1BQ9H0U4 201 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 CRLF2Q9HC73 371 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 SLC25A37Q9NYZ2 338 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 ZIM2Q9NZV7 527 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 FBXO9Q9UK97 447 aaPredicted RBP10.82□□□□□ -0.68
COPS7A-221ENST00000546229 MGAM2Q2M2H8 2515 aa10.82□□□□□ -0.68
COPS7A-221ENST00000546229 A0A1B0GWA3 101 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF99A8MXY4 864 aaPredicted RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 RGS16O15492 202 aaPredicted RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 TPST2O60704 377 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 SLC43A1O75387 559 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 KRT33AO76009 404 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF35P13682 527 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 IDO1P14902 403 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 NR4A1P22736 598 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 APEX1P27695 318 aaKnown RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 GRPRP30550 384 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 ARR3P36575 388 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 CRATP43155 626 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 CHN2P52757 468 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 DVL1P1P54792 670 aaPredicted RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 COPZ1P61923 177 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 SNTB2Q13425 540 aaKnown RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 LARS2Q15031 903 aaKnown RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 RGNQ15493 299 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 FXNQ16595 210 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 GLIPR1L2Q4G1C9 344 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 IQCCQ4KMZ1 466 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 ATG16L1Q676U5 607 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 SPATA21Q7Z572 469 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 CARM1Q86X55 608 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 C20orf196Q8IYI0 205 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 LINC01356Q8N9X3 169 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 CKAP2Q8WWK9 683 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 OR52B2Q96RD2 323 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 KCNS3Q9BQ31 491 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 SLC52A3Q9NQ40 469 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 MYEF2Q9P2K5 600 aaKnown RBP10.81□□□□□ -0.68
COPS7A-221ENST00000546229 PCDHB14Q9Y5E9 798 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 GMEB1Q9Y692 573 aa10.81□□□□□ -0.68
COPS7A-221ENST00000546229 TRBV5-3A0A0A0MS03 114 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 AIM2O14862 343 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 WNT9BO14905 357 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 RP2O75695 350 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 SLC22A3O75751 556 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 NCR1O76036 304 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 HLA-HP01893 362 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 BGLAPP02818 100 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ADRA2AP08913 450 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF43P17038 809 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 MRPL19P49406 292 aaKnown RBP10.8□□□□□ -0.68
COPS7A-221ENST00000546229 EVX1P49640 407 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ADRM1Q16186 407 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF311Q5JNZ3 666 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 KRT80Q6KB66 452 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ZNF584Q8IVC4 421 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 UBASH3BQ8TF42 649 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 MRPL24Q96A35 216 aaKnown RBP10.8□□□□□ -0.68
COPS7A-221ENST00000546229 SLC25A36Q96CQ1 311 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 ANKRD27Q96NW4 1050 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 TPK1Q9H3S4 243 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 IFT52Q9Y366 437 aa10.8□□□□□ -0.68
COPS7A-221ENST00000546229 FAM157AC9JC47 383 aa10.79□□□□□ -0.68
COPS7A-221ENST00000546229 TCF21O43680 179 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms