RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CD226Q15762 336 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 LIPNQ5VXI9 398 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.41□□□□□ -0.1
LDLR-204ENST00000545707 OR10AC1Q8NH08 325 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 ADAD1Q96M93 576 aaKnown RBP14.41□□□□□ -0.1
LDLR-204ENST00000545707 RBP7Q96R05 134 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 FRRS1LQ9P0K9 344 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 FOXJ3Q9UPW0 622 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 A0A1B0GVI7 797 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 LINC00862A6NCI5 91 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 H0YC42 278 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 TNFRSF10CO14798 259 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 GPRIN2O60269 458 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 GLCEO94923 617 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 MAS1P04201 325 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 CTHP32929 405 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 RAG2P55895 527 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 COL28A1Q2UY09 1125 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 LINC00303Q3SY05 128 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 SMUG1Q53HV7 270 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 TMEM69Q5SWH9 247 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 STAC2Q6ZMT1 411 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 ULBP3Q9BZM4 244 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 ACTR6Q9GZN1 396 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 NOX3Q9HBY0 568 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 KLHL9Q9P2J3 617 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 MRM2Q9UI43 246 aaKnown RBP14.41□□□□□ -0.1
LDLR-204ENST00000545707 PCDHGA5Q9Y5G8 931 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 FKBP7Q9Y680 259 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 RPS10-NUDT3A0A1W2PQS6 291 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 C17orf51A8MQB3 221 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 GABARAPH6UMI1 98 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ARPC3O15145 178 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 IFNA16P05015 189 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 EN2P19622 333 aaPredicted RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 P2RX1P51575 399 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 CTXN1P60606 82 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 TSPAN5P62079 268 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ZNF684Q5T5D7 378 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 GPR139Q6DWJ6 353 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 BAIAP2L2Q6UXY1 529 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 MCATQ8IVS2 390 aaKnown RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 SLC35F3Q8IY50 421 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 OR51A4Q8NGJ6 313 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 FCAMRQ8WWV6 532 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ASB12Q8WXK4 309 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 S100A16Q96FQ6 103 aaKnown RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 FOXN4Q96NZ1 517 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ELF4Q99607 663 aaPredicted RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 CLEC4MQ9H2X3 399 aaPredicted RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 CLDN16Q9Y5I7 305 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 TDRD6O60522 2096 aaKnown RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 MPDZO75970 2070 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 OR5K3A6NET4 321 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ELOA3DA6NLF2 546 aaPredicted RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 PDGFAP04085 211 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ALDOBP05062 364 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 LCN1P31025 176 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 HHEXQ03014 270 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 GRK1Q15835 563 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ELOA3BQ3SY89 546 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 MANEAQ5SRI9 462 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 JAZF1Q86VZ6 243 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 OOSP2Q86WS3 158 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 SIX5Q8N196 739 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ARHGEF39Q8N4T4 335 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 LSM14AQ8ND56 463 aaKnown RBP14.4□□□□□ -0.1
LDLR-204ENST00000545707 ELOA3Q8NG57 546 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 DGAT2Q96PD7 388 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 MFRPQ9BY79 579 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 OR10A5Q9H207 317 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 TCF7L1Q9HCS4 588 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 PRTFDC1Q9NRG1 225 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 MGAT4CQ9UBM8 478 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 ZNF69Q9UC07 566 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 SLCO1B1Q9Y6L6 691 aa14.4□□□□□ -0.1
LDLR-204ENST00000545707 EML5Q05BV3 1969 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TRAV8-7A0A075B6U6 113 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 EFCAB7A8K855 629 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 PDCD5O14737 125 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 UPK3AO75631 287 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TNFP01375 233 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 AKT2P31751 481 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 GPR3P46089 330 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 RPS4XP62701 263 aaKnown RBP14.39□□□□□ -0.11
LDLR-204ENST00000545707 LTBQ06643 244 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TCTE1Q5JU00 501 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 FBXO46Q6PJ61 603 aaPredicted RBP14.39□□□□□ -0.11
LDLR-204ENST00000545707 POMZP3Q6PJE2 187 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 COMMD7Q86VX2 200 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 ZNF321PQ8N8H1 164 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 OR52B4Q8NGK2 314 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 GPBAR1Q8TDU6 330 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TAS2R10Q9NYW0 307 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 IKZF2Q9UKS7 526 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TMEM184BQ9Y519 407 aaPredicted RBP14.39□□□□□ -0.11
LDLR-204ENST00000545707 ITGA10O75578 1167 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 PPM1BO75688 479 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 RNH1P13489 461 aaKnown RBP14.39□□□□□ -0.11
LDLR-204ENST00000545707 GRK6P43250 576 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms