RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 IDH3BO43837 385 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 OR10H3O60404 316 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ADAM11O75078 769 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 RCBTB2O95199 551 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 THY1P04216 161 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 GSTP1P09211 210 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 GKN3PP0CG01 181 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 OSMP13725 252 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PRG2P13727 222 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PRKCAP17252 672 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 TNFRSF1BP20333 461 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CHMP24386 653 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SRD5A2P31213 254 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CAPGP40121 348 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 IDH2P48735 452 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ERFP50548 548 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ASCL1P50553 236 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 DAPP51397 102 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PRPS1P60891 318 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CXCR4P61073 352 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ADARB1P78563 741 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 NPRL3Q12980 569 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 MED21Q13503 144 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SNTB1Q13884 538 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 QPRTQ15274 297 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 HSPB2Q16082 182 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ZNF239Q16600 458 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 EXOC3L2Q2M3D2 409 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PLPPR5Q32ZL2 321 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ELOA3BQ3SY89 546 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 FBXL19-AS1Q494R0 122 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 FGD3Q5JSP0 725 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 WIPI1Q5MNZ9 446 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SLC25A30Q5SVS4 291 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 OTUD3Q5T2D3 398 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 LPCAT4Q643R3 524 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PGBD2Q6P3X8 592 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 TTC33Q6PID6 262 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CBLN3Q6UW01 205 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PAMR1Q6UXH9 720 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SEM1Q6ZVN7 128 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ZER1Q7Z7L7 766 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 TMEM179BQ7Z7N9 219 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 MARCH3Q86UD3 253 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CDC20BQ86Y33 519 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 THNSL2Q86YJ6 484 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 RBM45Q8IUH3 476 aaKnown RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PRR22Q8IZ63 422 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SCAIQ8N9R8 606 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 WDSUB1Q8N9V3 476 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 RELL2Q8NC24 303 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ADPRHL1Q8NDY3 354 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ELOA3Q8NG57 546 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 OR2M3Q8NG83 312 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 OR1J4Q8NGS1 313 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 MAGEE2Q8TD90 523 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 FAM222BQ8WU58 562 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 C1GALT1C1Q96EU7 318 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 NR1H4Q96RI1 486 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 GPX7Q96SL4 187 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SLC29A1Q99808 456 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 WFDC6Q9BQY6 131 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PIGQQ9BRB3 760 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ADI1Q9BV57 179 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 UBQLN3Q9H347 655 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.46
CDCA3-209ENST00000544610 LDAHQ9H6V9 325 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 FKRPQ9H9S5 495 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PROK2Q9HC23 129 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 ACKR4Q9NPB9 350 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 SERINC1Q9NRX5 453 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 MED17Q9NVC6 651 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 VNN3Q9NY84 501 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 FLRT3Q9NZU0 649 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 CHRNA9Q9UGM1 479 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 EDARQ9UNE0 448 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 TRAPPC4Q9Y296 219 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PLEKHA6Q9Y2H5 1048 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 C15orf41Q9Y2V0 281 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 HDGFL3Q9Y3E1 203 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 U3KQV3 271 aa5.9□□□□□ -1.46
CDCA3-209ENST00000544610 PHF3Q92576 2039 aaKnown RBP5.9□□□□□ -1.47
CDCA3-209ENST00000544610 PCNX1Q96RV3 2341 aa5.9□□□□□ -1.47
CDCA3-209ENST00000544610 GTF3C1Q12789 2109 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 TRAV36DV7A0A075B6V5 113 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 NPIPA5A0A0B4J1W7 369 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 LOC102725191A0A1B0GVB3 256 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 SAC3D1A6NKF1 404 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 CPSF4LA6NMK7 179 aaKnown RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ZAR1LA6NP61 321 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 NPIPA7E9PJI5 369 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 PDLIM1O00151 329 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 ARPC3O15145 178 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 SEC14L5O43304 696 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 MRPS14O60783 128 aaKnown RBP5.89□□□□□ -1.47
CDCA3-209ENST00000544610 DIRAS1O95057 198 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 GASTP01350 101 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RAF1P04049 648 aa5.89□□□□□ -1.47
CDCA3-209ENST00000544610 RFPL3SP0C7P2 107 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms