RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SMPDL3BQ92485 455 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 DDOQ99489 341 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 CSAG2Q9Y5P2 127 aa27.33■■□□□ 1.97
CCM2-219ENST00000544363 PCMT1P22061 227 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 MTNR1AP48039 350 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 SLC35A1P78382 337 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 MVKQ03426 396 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 EMX1Q04741 257 aaPredicted RBP27.32■■□□□ 1.96
CCM2-219ENST00000544363 KLHL22Q53GT1 634 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 XAF1Q6GPH4 301 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 PNPLA5Q7Z6Z6 429 aaPredicted RBP27.32■■□□□ 1.96
CCM2-219ENST00000544363 SVOPQ8N4V2 548 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 TMEM251Q8N6I4 163 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 RNFT2Q96EX2 444 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 NMNAT3Q96T66 252 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 FANCFQ9NPI8 374 aa27.32■■□□□ 1.96
CCM2-219ENST00000544363 LINC01387J3KSC0 135 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 IGHMP01871 453 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 JUNBP17275 347 aaPredicted RBP27.31■■□□□ 1.96
CCM2-219ENST00000544363 NEDD8Q15843 81 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 MEPCEQ7L2J0 689 aaKnown RBP27.31■■□□□ 1.96
CCM2-219ENST00000544363 SATL1Q86VE3 508 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 KLHL15Q96M94 604 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 TXNIPQ9H3M7 391 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 MED12Q93074 2177 aa27.31■■□□□ 1.96
CCM2-219ENST00000544363 FAM166BA8MTA8 275 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 PLGP00747 810 aaPredicted RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 MAGEA5P43359 124 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 GFRA1P56159 465 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 JAZF1Q86VZ6 243 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 KDM8Q8N371 416 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 TMEM99Q8N816 258 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 LGALS12Q96DT0 336 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 QPCTLQ9NXS2 382 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 ZFHX4Q86UP3 3567 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 IRGMA1A4Y4 181 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 SERPINI2O75830 405 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 CDKN2AP42771 156 aaKnown RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 ID4P47928 161 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 RPL27P61353 136 aaKnown RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 PPIAP62937 165 aaKnown RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 RAB40BQ12829 278 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 KRR1Q13601 381 aaKnown RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 ACKR1Q16570 336 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 ZNF239Q16600 458 aaKnown RBP27.3■■□□□ 1.96
CCM2-219ENST00000544363 LEG1Q6P5S2 330 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 TMEM80Q96HE8 168 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 OR51V1Q9H2C8 321 aa27.3■■□□□ 1.96
CCM2-219ENST00000544363 A0A0J9YW62 118 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 A0A1W2PNV4 684 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 A0A1W2PRG6 482 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 RRP8O43159 456 aaKnown RBP27.29■■□□□ 1.96
CCM2-219ENST00000544363 FADS2O95864 444 aaKnown RBP27.29■■□□□ 1.96
CCM2-219ENST00000544363 SLC2A5P22732 501 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 MAP2K4P45985 399 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 P2RY4P51582 365 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 KLHL12Q53G59 568 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 MESTQ5EB52 335 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 SLC22A16Q86VW1 577 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 ARIH2OSQ8N7S6 290 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 OR52I1Q8NGK6 324 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 CDCA4Q9BXL8 241 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 WARS2Q9UGM6 360 aaKnown RBP27.29■■□□□ 1.96
CCM2-219ENST00000544363 COMMD3-BMI1R4GMX3 469 aa27.29■■□□□ 1.96
CCM2-219ENST00000544363 TRAV17A0A0B4J275 112 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 OR6C68A6NDL8 312 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 ADRA2AP08913 450 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 CELA3AP09093 270 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 CLUP10909 449 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 HLA-DOBP13765 273 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 CSNK2A1P68400 391 aaPredicted RBP27.28■■□□□ 1.96
CCM2-219ENST00000544363 TMED1Q13445 227 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 GTF2IRD2BQ6EKJ0 949 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 PXKQ7Z7A4 578 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 GTF2IRD2Q86UP8 949 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 ZPLD1Q8TCW7 415 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 NMNAT2Q9BZQ4 307 aa27.28■■□□□ 1.96
CCM2-219ENST00000544363 PCDHGA9Q9Y5G4 932 aaKnown RBP27.28■■□□□ 1.96
CCM2-219ENST00000544363 CCDC182A6NF36 153 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 NPIPB13A6NJU9 1138 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 SLC22A31A6NKX4 558 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 NPIPB4C9JG80 1138 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 IRF3Q14653 427 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 PAQR6Q6TCH4 344 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 OR9Q1Q8NGQ5 310 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 ZNF519Q8TB69 540 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 FAR1Q8WVX9 515 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 TMIGD2Q96BF3 282 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 TEAD3Q99594 435 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 FGF20Q9NP95 211 aaPredicted RBP27.27■■□□□ 1.96
CCM2-219ENST00000544363 ACOT13Q9NPJ3 140 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 AQP7P3A6NL99 342 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 TNFSF11O14788 317 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 ADRB1P08588 477 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 POU3F2P20265 443 aaPredicted RBP27.27■■□□□ 1.96
CCM2-219ENST00000544363 ACVR1BP36896 505 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 CLDN20P56880 219 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 ARMC4Q5T2S8 1044 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 IGFL3Q6UXB1 125 aa27.27■■□□□ 1.96
CCM2-219ENST00000544363 GGNQ86UU5 652 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms