RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 KTI12Q96EK9 354 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-208ENST00000544327 MAP6Q96JE9 813 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 TSPAN32Q96QS1 320 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 GFI1Q99684 422 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 TMEM246Q9BRR3 403 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 MRI1Q9BV20 369 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 BEX2Q9BXY8 128 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 DPAGT1Q9H3H5 408 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 ZNF275Q9NSD4 429 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-208ENST00000544327 UCKL1Q9NWZ5 548 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 COPZ2Q9P299 210 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 GRHPRQ9UBQ7 328 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 NUBP2Q9Y5Y2 271 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 A0A0B4J203 849 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 C4orf47A7E2U8 309 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 HSPB2A8KAH6 182 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 ALG1L2C9J202 215 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 AIPO00170 330 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 CDC40O60508 579 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■□□□□ 8.5
SCARB1-208ENST00000544327 ZFPL1O95159 310 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 FAPQ12884 760 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 TNK1Q13470 666 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 HSPB2Q16082 182 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 MESTQ5EB52 335 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 YOD1Q5VVQ6 348 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-208ENST00000544327 FAM220AQ7Z4H9 259 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 C9orf40Q8IXQ3 194 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 OR1L3Q8NH93 324 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 LGALS14Q8TCE9 139 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 DAZLQ92904 295 aaKnown RBP16.1■□□□□ 0.17
SCARB1-208ENST00000544327 TAAR8Q969N4 342 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 SCMH1Q96GD3 660 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 ANKRD10Q9NXR5 420 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 MRM2Q9UI43 246 aaKnown RBP16.1■□□□□ 0.17
SCARB1-208ENST00000544327 CA14Q9ULX7 337 aa16.1■□□□□ 0.17
SCARB1-208ENST00000544327 A0A1B0GVT2 93 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 OR6C70A6NIJ9 312 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 IFITM5A6NNB3 132 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 FAM171A2A8MVW0 826 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 IDSB3KWA1 339 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 NUDT21O43809 227 aaKnown RBP16.09■□□□□ 0.17
SCARB1-208ENST00000544327 SCO2O43819 266 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 ITGA10O75578 1167 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 HIST1H2ABP04908 130 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 FBLP22087 321 aaKnown RBP16.09■□□□□ 0.17
SCARB1-208ENST00000544327 IL12BP29460 328 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 EFNA3P52797 238 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 OR1D5P58170 312 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 CFHR1Q03591 330 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 MAB21L1Q13394 359 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 DYRK1AQ13627 763 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 CCDC85BQ15834 202 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-208ENST00000544327 EEF1A1P5Q5VTE0 462 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 HIST3H2AQ7L7L0 130 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 PLXDC1Q8IUK5 500 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 TOMM5Q8N4H5 51 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 ZNF441Q8N8Z8 693 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 HSD17B8Q92506 261 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 HIST1H2ACQ93077 130 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 SLC41A2Q96JW4 573 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 GTPBP2Q9BX10 602 aaKnown RBP16.09■□□□□ 0.17
SCARB1-208ENST00000544327 RTN4RQ9BZR6 473 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 PLEKHA1Q9HB21 404 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 GALNT9Q9HCQ5 603 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 MCUBQ9NWR8 336 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 MRPS17Q9Y2R5 130 aaKnown RBP16.09■□□□□ 0.17
SCARB1-208ENST00000544327 KLHDC2Q9Y2U9 406 aa16.09■□□□□ 0.17
SCARB1-208ENST00000544327 TRAV36DV7A0A075B6V5 113 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 TRBV5-5A0A0J9YX44 114 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 TMEM72A0PK05 275 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 OR6C76A6NM76 312 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 CENPBD1B2RD01 187 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 SDC3O75056 442 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 DHFRP00374 187 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 RENP00797 406 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 ARL4DP49703 201 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 RAG2P55895 527 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 DGCR2P98153 550 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.17
SCARB1-208ENST00000544327 EGR3Q06889 387 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 ALKBH1Q13686 389 aaKnown RBP16.08■□□□□ 0.17
SCARB1-208ENST00000544327 SNAP47Q5SQN1 464 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 PRSS42Q7Z5A4 293 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 KMT5CQ86Y97 462 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 PLCZ1Q86YW0 608 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 SIAH3Q8IW03 269 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 ZNF671Q8TAW3 534 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 SMIM4Q8WVI0 70 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 ADAD1Q96M93 576 aaKnown RBP16.08■□□□□ 0.17
SCARB1-208ENST00000544327 TSSK2Q96PF2 358 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 GAL3ST4Q96RP7 486 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 WWTR1Q9GZV5 400 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 ZNF304Q9HCX3 659 aa16.08■□□□□ 0.17
SCARB1-208ENST00000544327 DHCR7Q9UBM7 475 aaKnown RBP16.08■□□□□ 0.17
SCARB1-208ENST00000544327 PHYHO14832 338 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 DUX1O43812 170 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 SERPINI2O75830 405 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 MT-ATP6P00846 226 aa16.08■□□□□ 0.16
SCARB1-208ENST00000544327 F13BP05160 661 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms