RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 HIST1H2ACQ93077 130 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 APH1AQ96BI3 265 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 FANCFQ9NPI8 374 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 VNN3Q9NY84 501 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 ELOVL5Q9NYP7 299 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 FREM1Q5H8C1 2179 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 HECTD1Q9ULT8 2610 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 SH3PXD2BA1X283 911 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 BLOC1S5-TXNDC5H3BN57 136 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 AHCYP23526 432 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 UGT2B10P36537 528 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 GPR4P46093 362 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 LIMS1P48059 325 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 SELENOPP49908 381 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 CLDN17P56750 224 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 SMIM11AP58511 58 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 SORDQ00796 357 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 POU3F1Q03052 451 aaPredicted RBP13.34□□□□□ -0.27
CD9-210ENST00000543916 LGALS3BPQ08380 585 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 ZP4Q12836 540 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
CD9-210ENST00000543916 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 NIPAL3Q6P499 406 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 STAC2Q6ZMT1 411 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 Q6ZT83 130 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
CD9-210ENST00000543916 KIF18BQ86Y91 864 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 UEVLDQ8IX04 471 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 OR4K5Q8NGD3 323 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 SPOCK3Q9BQ16 436 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 AURKCQ9UQB9 309 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 NOX1Q9Y5S8 564 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 LYVE1Q9Y5Y7 322 aa13.34□□□□□ -0.27
CD9-210ENST00000543916 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 EFCAB9A8MZ26 197 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 RNF13O43567 381 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 SERPINI2O75830 405 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 ZNF432O94892 652 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 OR6A2O95222 327 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 ADAP00813 363 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
CD9-210ENST00000543916 COX6B1P14854 86 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 AQP2P41181 271 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 OMPP47874 163 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 PCYT1AP49585 367 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.28
CD9-210ENST00000543916 RPL18Q07020 188 aaKnown RBP13.33□□□□□ -0.28
CD9-210ENST00000543916 FHL1Q13642 323 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 TSC22D1Q15714 1073 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 FBXW9Q5XUX1 488 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 TMPRSS11FQ6ZWK6 438 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 RRM2BQ7LG56 351 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 PXKQ7Z7A4 578 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 UBE2J2Q8N2K1 259 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 OR4C15Q8NGM1 316 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 MOSPD2Q8NHP6 518 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 SLCO4A1Q96BD0 722 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.28
CD9-210ENST00000543916 TXNDC15Q96J42 360 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 ALPK1Q96QP1 1244 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 OR2M2Q96R28 347 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 MED29Q9NX70 200 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 MALT1Q9UDY8 824 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 RCE1Q9Y256 329 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 TMEM5Q9Y2B1 443 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
CD9-210ENST00000543916 TRAV27A0A087WT01 109 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 C16orf97H3BN30 126 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 F13BP05160 661 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 COX5AP20674 150 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 HMGA2P52926 109 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 FOXG1P55316 489 aaPredicted RBP13.32□□□□□ -0.28
CD9-210ENST00000543916 FAPQ12884 760 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
CD9-210ENST00000543916 CCNIQ14094 377 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 LAPTM4AQ15012 233 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 C1orf146Q5VVC0 180 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 OR2T5Q6IEZ7 315 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 CDK20Q8IZL9 346 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 TMEM123Q8N131 208 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 PAPD5Q8NDF8 572 aaKnown RBP13.32□□□□□ -0.28
CD9-210ENST00000543916 OR2T29Q8NH02 315 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 RSRC1Q96IZ7 334 aaKnown RBP13.32□□□□□ -0.28
CD9-210ENST00000543916 GPA33Q99795 319 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 EMC6Q9BV81 110 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 SLCO5A1Q9H2Y9 848 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 HIF3AQ9Y2N7 669 aa13.32□□□□□ -0.28
CD9-210ENST00000543916 SLC35F4A4IF30 521 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 TNFRSF11BO00300 401 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 KLF4O43474 513 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 FKBP6O75344 327 aa13.31□□□□□ -0.28
CD9-210ENST00000543916 CIB2O75838 187 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms