RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SREBF2Q12772 1141 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 CHAF1BQ13112 559 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 KCNAB1Q14722 419 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 SSX2Q16385 188 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 WDR88Q6ZMY6 472 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 MAMDC2Q7Z304 686 aaPredicted RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 CDK20Q8IZL9 346 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 NUP43Q8NFH3 380 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 ADAMTS15Q8TE58 950 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 TOX2Q96NM4 488 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 HRH4Q9H3N8 390 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 KLHL31Q9H511 634 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 CDV3Q9UKY7 258 aaKnown RBP11.63□□□□□ -0.55
SMG8-202ENST00000543872 PCDHGA1Q9Y5H4 931 aa11.63□□□□□ -0.55
SMG8-202ENST00000543872 OGG1O15527 345 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 RCBTB2O95199 551 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 PRLHRP49683 370 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 ATP1B3P54709 279 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 POLR2LP62875 67 aaKnown RBP11.62□□□□□ -0.55
SMG8-202ENST00000543872 LY6G6FQ5SQ64 297 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 GDPD4Q6W3E5 623 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 SLC24A5Q71RS6 500 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 OR1J4Q8NGS1 313 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 OR6K6Q8NGW6 343 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 ARL11Q969Q4 196 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TIFAQ96CG3 184 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 UTP23Q9BRU9 249 aaKnown RBP11.62□□□□□ -0.55
SMG8-202ENST00000543872 LAMA3Q16787 3333 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 NPIPA5A0A0B4J1W7 369 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 C17orf113A0A1B0GUU1 675 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 NPIPA7E9PJI5 369 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 M0QYG6 137 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 RAB40ALP0C0E4 278 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 OR4E1P0C645 316 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 NPIPA8P0DM63 369 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 F3P13726 295 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 PCP4P48539 62 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TGIF1Q15583 401 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 PGAP1Q75T13 922 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 DMBX1Q8NFW5 382 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 OR9A2Q8NGT5 310 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 AKR7LQ8NHP1 331 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 GRHL3Q8TE85 626 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TMEM239Q8WW34 195 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TMED6Q8WW62 240 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 ZNF689Q96CS4 500 aaPredicted RBP11.62□□□□□ -0.55
SMG8-202ENST00000543872 MEGF10Q96KG7 1140 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 KCNK15Q9H427 330 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 CENPVL1A0A0U1RR11 272 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 ZNF749O43361 778 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 PSMD4P55036 377 aaKnown RBP11.62□□□□□ -0.55
SMG8-202ENST00000543872 LTBQ06643 244 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 AMZ1Q400G9 498 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 PPP1R1CQ8WVI7 109 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 TNFRSF13CQ96RJ3 184 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 VWA8A3KMH1 1905 aa11.62□□□□□ -0.55
SMG8-202ENST00000543872 GLSO94925 669 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 ZIC2O95409 532 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 RPN2P04844 631 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 NQO2P16083 231 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 SDHAP31040 664 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ACTC1P68032 377 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ACTA1P68133 377 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 RPL22L1Q6P5R6 122 aaKnown RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 DCUN1D3Q8IWE4 304 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 TRAM1L1Q8N609 369 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 NUBPLQ8TB37 319 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 MICU1Q9BPX6 476 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 FARSAQ9Y285 508 aaKnown RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 HEATR5BQ9P2D3 2071 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 H7C417 338 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ABOP16442 354 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 SPI1P17947 270 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 GPR143P51810 404 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 PRAMEF17Q5VTA0 474 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 FAM46CQ5VWP2 391 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 SLC16A11Q8NCK7 471 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 OR6N1Q8NGY5 312 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 MIB2Q96AX9 1013 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 CNRIP1Q96F85 164 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
SMG8-202ENST00000543872 UQCC1Q9NVA1 299 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 WBP1LQ9NX94 342 aa11.61□□□□□ -0.55
SMG8-202ENST00000543872 MTFP1Q9UDX5 166 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms