RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ARID1AO14497 2285 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ANKHD1Q8IWZ3 2542 aaKnown RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 A0A096LPE4 126 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 IGHV1-18A0A0C4DH31 117 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 A0A1W2PPZ6 126 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 B9A039 149 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ATP6V1G2-DDX39BF2Z307 99 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MS4A18H0YCH9 400 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 H7C417 338 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 M0R3G1 203 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 CD5LO43866 347 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 EDF1O60869 148 aaKnown RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 CRLF1O75462 422 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MFN2O95140 757 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MT-ATP6P00846 226 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 NPPAP01160 153 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 IFNA14P01570 189 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ADORA3P0DMS8 318 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 UMPSP11172 480 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 CBR1P16152 277 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 HOXB9P17482 250 aaPredicted RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 CD247P20963 164 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 IFNA8P32881 189 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 LSP1P33241 339 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SERPINF1P36955 418 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 PDLIM4P50479 330 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 EFNA4P52798 201 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ARF1P84077 181 aaKnown RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 SPOCK1Q08629 439 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MAPRE2Q15555 327 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 CEACAM16Q2WEN9 425 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MS4A18Q3C1V0 323 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 GLIPR1L2Q4G1C9 344 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ENTPD8Q5MY95 495 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SWT1Q5T5J6 900 aaKnown RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 CARD17Q5XLA6 110 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ZNF613Q6PF04 617 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 VHLLQ6RSH7 139 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 C6orf89Q6UWU4 347 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 DLEU7Q6UYE1 221 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SLC46A3Q7Z3Q1 461 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 DPP10Q8N608 796 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 FAM169BQ8N8A8 192 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SCAIQ8N9R8 606 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SMYD1Q8NB12 490 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ADPRHL1Q8NDY3 354 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 STON2Q8WXE9 905 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 NANOS1Q8WY41 292 aaKnown RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 PROX1Q92786 737 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 ALKBH3Q96Q83 286 aaPredicted RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 CGREF1Q99674 301 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 TMEM43Q9BTV4 400 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 PRR14Q9BWN1 585 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 RAB1BQ9H0U4 201 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 CRLF2Q9HC73 371 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 GPR35Q9HC97 309 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 MYOZ1Q9NP98 299 aaPredicted RBP6.25□□□□□ -1.41
NUP43-206ENST00000543637 SLC52A3Q9NQ40 469 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 GID8Q9NWU2 228 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 SPG11Q96JI7 2443 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 AKAP6Q13023 2319 aa6.25□□□□□ -1.41
NUP43-206ENST00000543637 POLQO75417 2590 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 PRR14LQ5THK1 2151 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 HIVEP1P15822 2718 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 A0A0B4J2E0 115 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 A0A1B0GX12 115 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 SLC35F4A4IF30 521 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 TRAPPC13A5PLN9 417 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 CPSF4LA6NMK7 179 aaKnown RBP6.24□□□□□ -1.41
NUP43-206ENST00000543637 A8MV72 311 aaPredicted RBP6.24□□□□□ -1.41
NUP43-206ENST00000543637 ZNF99A8MXY4 864 aaPredicted RBP6.24□□□□□ -1.41
NUP43-206ENST00000543637 C11orf98E9PRG8 122 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 NDUFS8O00217 210 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 RNF13O43567 381 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 CHP2O43745 196 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 FMO6PO60774 539 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 SERPINI2O75830 405 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 PDE5AO76074 875 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 ZNF432O94892 652 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 BGLAPP02818 100 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 CD79AP11912 226 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 NPR2P20594 1047 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 P2RY4P51582 365 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 ARFIP2P53365 341 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 CDH12P55289 794 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 LSM11P83369 360 aaKnown RBP eCLIP6.24□□□□□ -1.41
NUP43-206ENST00000543637 SLC25A3Q00325 362 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 GALK2Q01415 458 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 NAAAQ02083 359 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 POU3F1Q03052 451 aaPredicted RBP6.24□□□□□ -1.41
NUP43-206ENST00000543637 LGALS3BPQ08380 585 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 PUDPQ08623 228 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 NPRL3Q12980 569 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 NPTX1Q15818 432 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 CARTPTQ16568 116 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 DUSP7Q16829 419 aa6.24□□□□□ -1.41
NUP43-206ENST00000543637 TRMT5Q32P41 509 aaKnown RBP6.24□□□□□ -1.41
NUP43-206ENST00000543637 IQCCQ4KMZ1 466 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms