RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 WFDC5Q8TCV5 224 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 CDCP1Q9H5V8 836 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 FLVCR2Q9UPI3 526 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 MOKQ9UQ07 419 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 AKR1C2P52895 323 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 REEP5Q00765 189 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 AKR1C1Q04828 323 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 CLPPQ16740 277 aaPredicted RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 WBP2NLQ6ICG8 309 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 C3orf33Q6P1S2 294 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 KIAA1958Q8N8K9 716 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 BORCS8Q96FH0 119 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 INSM2Q96T92 566 aaPredicted RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 SMCO4Q9NRQ5 59 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 A6NIZ1 184 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 GPR171O14626 319 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 PRSS23O95084 383 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 SLC2A10O95528 541 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 OR10A3P58181 314 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 RAP1BP61224 184 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 RAP1AP62834 184 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 SERTAD2Q14140 314 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF620Q6ZNG0 422 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 WDFY2Q96P53 400 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 TGM7Q96PF1 710 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 NIT2Q9NQR4 276 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 A0A0A6YYC8 382 aaPredicted RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 I3L1I5 382 aaPredicted RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 DSCR3O14972 297 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 HMGA1P17096 107 aaKnown RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 RAD52P43351 418 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 PLA2G7Q13093 441 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 ALKBH1Q13686 389 aaKnown RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 NSDHLQ15738 373 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 OR4K15Q8NH41 348 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 SLC2A12Q8TD20 617 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 ZMAT3Q9HA38 289 aaKnown RBP17.9■□□□□ 0.46
SUDS3-204ENST00000543473 F5P12259 2224 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 H7C1C5 153 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 LCN6P62502 163 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 SYT9Q86SS6 491 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 PRR22Q8IZ63 422 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 ZDHHC12Q96GR4 267 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 FBRSQ9HAH7 460 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 STEAP1Q9UHE8 339 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 TBX21Q9UL17 535 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 KCNS2Q9ULS6 477 aa17.9■□□□□ 0.46
SUDS3-204ENST00000543473 PRSS44E7EML9 344 aa17.89■□□□□ 0.46
SUDS3-204ENST00000543473 HOXC12P31275 282 aa17.89■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM151BQ8IW70 566 aa17.89■□□□□ 0.46
SUDS3-204ENST00000543473 FGF20Q9NP95 211 aaPredicted RBP17.89■□□□□ 0.46
SUDS3-204ENST00000543473 NCDNQ9UBB6 729 aa17.89■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF223Q9UK11 482 aaPredicted RBP17.89■□□□□ 0.46
SUDS3-204ENST00000543473 PUS1Q9Y606 427 aaKnown RBP eCLIP17.89■□□□□ 0.46
SUDS3-204ENST00000543473 UPK1AO00322 258 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 HEXBP07686 556 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 DRD1P21728 446 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 IRS1P35568 1242 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 HCCSP53701 268 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 SNU13P55769 128 aaKnown RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 PDZK1IP1Q13113 114 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 EBPQ15125 230 aaKnown RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ABHD12BQ7Z5M8 362 aaPredicted RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 TECPR1Q7Z6L1 1165 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 FAM3DQ96BQ1 224 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ATF6BQ99941 703 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 SLCO5A1Q9H2Y9 848 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 FAM212BQ9NTI7 297 aaPredicted RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ENTPD2Q9Y5L3 495 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 RGS13O14921 159 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 CLLU1Q5K131 121 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 MEX3BQ6ZN04 569 aaKnown RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 P4HA3Q7Z4N8 544 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF695Q8IW36 515 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 OR6M1Q8NGM8 313 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ST6GAL2Q96JF0 529 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 OR1F2PQ96R84 312 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 GFOD1Q9NXC2 390 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ALKBH4Q9NXW9 302 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 EHFQ9NZC4 300 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF28P17035 718 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 GJA4P35212 333 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 YOD1Q5VVQ6 348 aaPredicted RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 SLC48A1Q6P1K1 146 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 RRNAD1Q96FB5 475 aaKnown RBP17.89■□□□□ 0.45
SUDS3-204ENST00000543473 STARD5Q9NSY2 213 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 SLC22A7Q9Y694 548 aa17.89■□□□□ 0.45
SUDS3-204ENST00000543473 NUP214P35658 2090 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 ETHE1O95571 254 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 CRB3Q9BUF7 120 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 HRASLSQ9HDD0 168 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 PAPPA2Q9BXP8 1791 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 PIGBOS1A0A0B4J2F0 54 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 C17orf105B2RV13 164 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 KDM4EB2RXH2 506 aaPredicted RBP17.88■□□□□ 0.45
SUDS3-204ENST00000543473 LGALS8O00214 317 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 HHEXQ03014 270 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 TDGQ13569 410 aa17.88■□□□□ 0.45
SUDS3-204ENST00000543473 PRAMEF8Q5VWM4 474 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms