RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FASNP49327 2511 aaKnown RBP4.84□□□□□ -1.64
CPSF7-220ENST00000541963 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 C15orf38-AP3S2A0A0A6YYH1 394 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 A0A0G2JK05 382 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 A0A0G2JMM0 328 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 TMEM272A0A1B0GTI8 110 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 A0A1W2PPB8 328 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 A0A1W2PRS3 328 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 TMEM120BA0PK00 339 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 MAGEA13PA6NCF6 341 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 KIR3DP1A8MWS1 328 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 SCAMP2O15127 329 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CFLARO15519 480 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ITM2AO43736 263 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 TSPAN2O60636 221 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 UGT2B11O75310 529 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 DCTN3O75935 186 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 WISP2O76076 250 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 RGS11O94810 467 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ACTL6AO96019 429 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 HPNP05981 417 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ALOX5P09917 674 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 HPGDP15428 266 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 LBPP18428 481 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 EDN2P20800 178 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 HTR1EP28566 365 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 LCN1P31025 176 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 GABRA3P34903 492 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PSMB10P40306 273 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 FRKP42685 505 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CDK9P50750 372 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CLDN8P56748 225 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 SORDQ00796 357 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 C17orf67Q0P5P2 114 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 GTF3C1Q12789 2109 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PDE7AQ13946 482 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PTGR1Q14914 329 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ANXA8L1Q5VT79 327 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 DCAF12L2Q5VW00 463 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 FAM219BQ5XKK7 198 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ANKRD26P1Q6NSI1 321 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ENPP6Q6UWR7 440 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 B3GNT6Q6ZMB0 384 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CHMP1BQ7LBR1 199 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 SZRD1Q7Z422 152 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 SPATA19Q7Z5L4 167 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PLCZ1Q86YW0 608 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ZNF781Q8N8C0 355 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 TEX45Q8NA69 505 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 OR5M9Q8NGP3 310 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 OR10Q1Q8NGQ4 319 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CLHC1Q8NHS4 586 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 NEIL3Q8TAT5 605 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 MGARPQ8TDB4 240 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 GPR151Q8TDV0 419 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ITLN2Q8WWU7 325 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 RPL36ALQ969Q0 106 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 TLCD1Q96CP7 247 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 MSI2Q96DH6 328 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 FAM120BQ96EK7 910 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 C3orf30Q96M34 536 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 MS4A4EQ96PG1 132 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 NODALQ96S42 347 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 LMF2Q9BU23 707 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 C1orf50Q9BV19 199 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 DPY30Q9C005 99 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 HOXD1Q9GZZ0 328 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PTGES2Q9H7Z7 377 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 DCLRE1BQ9H816 532 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ANKRA2Q9H9E1 313 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PROK2Q9HC23 129 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ZCCHC3Q9NUD5 404 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 GIN1Q9NXP7 522 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 FAF1Q9UNN5 650 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ABCG2Q9UNQ0 655 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 ARL2BPQ9Y2Y0 163 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 MRPS18CQ9Y3D5 142 aaKnown RBP4.83□□□□□ -1.64
CPSF7-220ENST00000541963 SNX8Q9Y5X2 465 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 PTGDR2Q9Y5Y4 395 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 EML6Q6ZMW3 1958 aa4.83□□□□□ -1.64
CPSF7-220ENST00000541963 NINQ8N4C6 2090 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 SMIM31A0A1B0GVY4 71 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 hCG_1807616A0A1W2PRN6 198 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 DUXAA6NLW8 204 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 KDM4EB2RXH2 506 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 MS4A18H0YCH9 400 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 HDAC3O15379 428 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 E2F6O75461 281 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 NKX2-2O95096 273 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 PSMG1O95456 288 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 CLDN1O95832 211 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 RPSAP08865 295 aaKnown RBP4.82□□□□□ -1.64
CPSF7-220ENST00000541963 RNF224P0DH78 156 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 LAMP1P11279 417 aa4.82□□□□□ -1.64
CPSF7-220ENST00000541963 G6PDP11413 515 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms