RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 OR6C65A6NJZ3 312 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 SHISA9B4DS77 424 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 PLPP3O14495 311 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 SLC43A1O75387 559 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 MT-ATP6P00846 226 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 NUDT2P50583 147 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 SLC7A2P52569 658 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 GNGT1P63211 74 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 ROR2Q01974 943 aaKnown RBP13.72□□□□□ -0.21
CIT-210ENST00000539413 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
CIT-210ENST00000539413 SPOCK1Q08629 439 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 ZNF74Q16587 644 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 KLHL17Q6TDP4 642 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 TMEM108Q6UXF1 575 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 CPLX4Q7Z7G2 160 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
CIT-210ENST00000539413 BOD1Q96IK1 185 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 MPP4Q96JB8 637 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 OR2M2Q96R28 347 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 HOPXQ9BPY8 73 aaPredicted RBP13.72□□□□□ -0.21
CIT-210ENST00000539413 EMC6Q9BV81 110 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 LAMP3Q9UQV4 416 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 AP3M1Q9Y2T2 418 aa13.72□□□□□ -0.21
CIT-210ENST00000539413 ABCA4P78363 2273 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
CIT-210ENST00000539413 CH25HO95992 272 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 SOD3P08294 240 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 DANCRP0C864 163 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 AHCYP23526 432 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PTAFRP25105 342 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 CD40P25942 277 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PTH2RP49190 550 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 TAS2R41P59536 307 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PRPS1P60891 318 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 SELENOWP63302 87 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PUDPQ08623 228 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PIN1Q13526 163 aaPredicted RBP13.71□□□□□ -0.21
CIT-210ENST00000539413 TBRG1Q3YBR2 411 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 Q5PR19 223 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PHYHD1Q5SRE7 291 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 SHEQ5VZ18 495 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 KLHL24Q6TFL4 600 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 NKAIN4Q8IVV8 208 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 GPR137CQ8N3F9 429 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 LRRC17Q8N6Y2 441 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 OR5J2Q8NH18 312 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 SMAP2Q8WU79 429 aaPredicted RBP13.71□□□□□ -0.21
CIT-210ENST00000539413 CMTM5Q96DZ9 223 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 TXNDC15Q96J42 360 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
CIT-210ENST00000539413 MED29Q9NX70 200 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 CISD1Q9NZ45 108 aaKnown RBP13.71□□□□□ -0.21
CIT-210ENST00000539413 RIMS3Q9UJD0 308 aa13.71□□□□□ -0.21
CIT-210ENST00000539413 PRRC2AP48634 2157 aaKnown RBP13.71□□□□□ -0.22
CIT-210ENST00000539413 AKAP6Q13023 2319 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 A0A096LPE4 126 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 A0A1W2PPZ6 126 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 C11orf98E9PRG8 122 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 ARHGEF9O43307 516 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 SERPINI2O75830 405 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 OR5F1O95221 314 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 ADORA3P0DMS8 318 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 GSK3BP49841 420 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 CDH11P55287 796 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 RPS4XP62701 263 aaKnown RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 PGGHGQ32M88 737 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 CARD17Q5XLA6 110 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 PXKQ7Z7A4 578 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 PIK3C3Q8NEB9 887 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 TMEM255BQ8WV15 326 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 BCL2L2Q92843 193 aaPredicted RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 ZNF837Q96EG3 531 aaPredicted RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 SLC19A3Q9BZV2 496 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 POLR2J2Q9GZM3 115 aaKnown RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 POLR2J3Q9H1A7 115 aaKnown RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 NELFAQ9H3P2 528 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 ALG2Q9H553 416 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 CXorf56Q9H5V9 222 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 FKRPQ9H9S5 495 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 GPR35Q9HC97 309 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 NANSQ9NR45 359 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 ZNF701Q9NV72 531 aaPredicted RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 MGAT4BQ9UQ53 548 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 NOX1Q9Y5S8 564 aa13.7□□□□□ -0.22
CIT-210ENST00000539413 MAGED1Q9Y5V3 778 aaPredicted RBP13.7□□□□□ -0.22
CIT-210ENST00000539413 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 RPL36A-HNRNPH2H7BZ11 118 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 M0R3G1 203 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 CXCR6O00574 342 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 OR6A2O95222 327 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 WNT11O96014 354 aa13.69□□□□□ -0.22
CIT-210ENST00000539413 PAX1P15863 534 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms