RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 AURKCQ9UQB9 309 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 YTHDF2Q9Y5A9 579 aaKnown RBP2.14□□□□□ -2.07
CCDC7-209ENST00000539197 BRWD3Q6RI45 1802 aa2.14□□□□□ -2.07
CCDC7-209ENST00000539197 GPRASP1Q5JY77 1395 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 PRSS37A4D1T9 235 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 LRP5LA4QPB2 252 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 A8MXQ7 604 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 H3BNH8 94 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 XKRYO14609 159 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 DIRAS3O95661 229 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 OXSR1O95747 527 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ALDOBP05062 364 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 UBTFL1P0CB47 393 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 EPB41P11171 864 aaKnown RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 NPR2P20594 1047 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 CNR1P21554 472 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 NPY1RP25929 384 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 RDXP35241 583 aaKnown RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 HMGCS1Q01581 520 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 USH1GQ495M9 461 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ZBED5Q49AG3 693 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 NCR3LG1Q68D85 454 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 Q8N976 141 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 OR2G3Q8NGZ4 309 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 OR1F12Q8NHA8 337 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ACOT11Q8WXI4 607 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 RIOK2Q9BVS4 552 aaKnown RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ULBP2Q9BZM5 246 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 GBA3Q9H227 469 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 NHEJ1Q9H9Q4 299 aaPredicted RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ZFP14Q9HCL3 533 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 CLCF1Q9UBD9 225 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 PCSK1NQ9UHG2 260 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 MRPS33Q9Y291 106 aaKnown RBP2.13□□□□□ -2.07
CCDC7-209ENST00000539197 ATP8B3O60423 1300 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 FANCIQ9NVI1 1328 aa2.13□□□□□ -2.07
CCDC7-209ENST00000539197 IGKV3D-11A0A0A0MRZ8 115 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 TRAV40A0A0B4J280 105 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 ENTPD5O75356 428 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 IDH1O75874 414 aaKnown RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 IGHG4P01861 327 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 CISD3P0C7P0 127 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 NCF1P14598 390 aaPredicted RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 MMP11P24347 488 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 HMGB2P26583 209 aaKnown RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 RPS14P62263 151 aaKnown RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 GNMTQ14749 295 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 OR2G6Q5TZ20 316 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 LCN12Q6JVE5 192 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 PLA2G4DQ86XP0 818 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 SLC38A6Q8IZM9 456 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 ACOT4Q8N9L9 421 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 CD300LFQ8TDQ1 290 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 ZFP90Q8TF47 636 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 DNAJC19Q96DA6 116 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 CLCC1Q96S66 551 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 RNF2Q99496 336 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 THUMPD2Q9BTF0 503 aaKnown RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 DNTTIP1Q9H147 329 aa2.12□□□□□ -2.07
CCDC7-209ENST00000539197 ZNF430Q9H8G1 570 aaPredicted RBP2.12□□□□□ -2.07
CCDC7-209ENST00000539197 A0A1W2PP18 115 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 BTN3A3O00478 584 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 MED7O43513 233 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CD5LO43866 347 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CSF3P09919 207 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CHI3L1P36222 383 aaPredicted RBP2.11□□□□□ -2.07
CCDC7-209ENST00000539197 ERVK-25P63136 954 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 ACVR1Q04771 509 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 GANABQ14697 944 aaKnown RBP2.11□□□□□ -2.07
CCDC7-209ENST00000539197 OXA1LQ15070 435 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 SGCAQ16586 387 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 GRAMD2AQ8IUY3 354 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 FAM86B1Q8N7N1 296 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CATSPER1Q8NEC5 780 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 OR4D5Q8NGN0 318 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 ACTRT1Q8TDG2 376 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 SMARCD2Q92925 531 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 PELI1Q96FA3 418 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 TPPP3Q9BW30 176 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 MRPL47Q9HD33 250 aaKnown RBP2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CTPS2Q9NRF8 586 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 TAS2R3Q9NYW6 316 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 RNF14Q9UBS8 474 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 RFNGQ9Y644 331 aa2.11□□□□□ -2.07
CCDC7-209ENST00000539197 CARMIL3Q8ND23 1372 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 TCRBV9S1A1TA0A576 114 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 ATP5LO75964 103 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 VAMP5O95183 116 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 ZDHHC11BP0C7U3 371 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 GKN3PP0CG01 181 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 MUC1P15941 1255 aaPredicted RBP2.1□□□□□ -2.07
CCDC7-209ENST00000539197 PGAM1P18669 254 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 ATP6V1C1P21283 382 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 PCMT1P22061 227 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 CD34P28906 385 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 GDI1P31150 447 aa2.1□□□□□ -2.07
CCDC7-209ENST00000539197 BTCP35070 178 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms