RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CARTPTQ16568 116 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 FAM69AQ5T7M9 428 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 FAM166AQ6J272 317 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 C5orf46Q6UWT4 87 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 MSRB3Q8IXL7 192 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 TMEM123Q8N131 208 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 LSMEM1Q8N8F7 131 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 OR4F15Q8NGB8 312 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 SLC38A4Q969I6 547 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 TAAR8Q969N4 342 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 TLCD1Q96CP7 247 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
VAMP1-206ENST00000538970 FOXN4Q96NZ1 517 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 OXGR1Q96P68 337 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF587Q96SQ5 575 aaPredicted RBP10.85□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF442Q9H7R0 627 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 CHODLQ9H9P2 273 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 SLC25A37Q9NYZ2 338 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 RPS6KB2Q9UBS0 482 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 KCNS2Q9ULS6 477 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 USH1CQ9Y6N9 552 aa10.85□□□□□ -0.67
VAMP1-206ENST00000538970 TRAV36DV7A0A075B6V5 113 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 ARAFP10398 606 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 GRPRP30550 384 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 THBS4P35443 961 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 IDH3GP51553 393 aaPredicted RBP10.84□□□□□ -0.67
VAMP1-206ENST00000538970 SRSF2Q01130 221 aaKnown RBP10.84□□□□□ -0.67
VAMP1-206ENST00000538970 C1DQ13901 141 aaKnown RBP10.84□□□□□ -0.67
VAMP1-206ENST00000538970 LRIF1Q5T3J3 769 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 GCNT6Q5T4J0 391 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 DHRS4L2Q6PKH6 230 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 EPGNQ6UW88 154 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 IL17RELQ6ZVW7 336 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 C10orf111Q8N326 155 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 GPR137CQ8N3F9 429 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 ADPRHL1Q8NDY3 354 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 PIK3C3Q8NEB9 887 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 NFKBIDQ8NI38 313 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
VAMP1-206ENST00000538970 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 BPESC1Q9GZL8 116 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 CRLF2Q9HC73 371 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 KLHL14Q9P2G3 628 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 ARFGEF3Q5TH69 2177 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 SVEP1Q4LDE5 3571 aa10.84□□□□□ -0.67
VAMP1-206ENST00000538970 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 LOC102725191A0A1B0GVB3 256 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF99A8MXY4 864 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 hCG_2039718K7EN88 272 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 AKAP8O43823 692 aaKnown RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 TPST1O60507 370 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SEC14L2O76054 403 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF23P17027 643 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SRD5A1P18405 259 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 NPR2P20594 1047 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 ARR3P36575 388 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 STX1BP61266 288 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 NPRL3Q12980 569 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 GLIPR1L2Q4G1C9 344 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 IQCCQ4KMZ1 466 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 ALG10BQ5I7T1 473 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 PHYHD1Q5SRE7 291 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 FAM120AOSQ5T036 256 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 H1FNTQ75WM6 255 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 NET1Q7Z628 596 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 MDP1Q86V88 176 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 FUNDC1Q8IVP5 155 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 DNAJA4Q8WW22 397 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SLC41A3Q96GZ6 507 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SOX7Q9BT81 388 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 RAB1BQ9H0U4 201 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 NOX3Q9HBY0 568 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 TMBIM4Q9HC24 238 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 TCF7L2Q9NQB0 619 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 SLAMF8Q9P0V8 285 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 TESQ9UGI8 421 aaKnown RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 FBXO9Q9UK97 447 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-206ENST00000538970 GMEB1Q9Y692 573 aa10.83□□□□□ -0.68
VAMP1-206ENST00000538970 TRBV5-3A0A0A0MS03 114 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 A0A1B0GX12 115 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 M0R3G1 203 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 POLR3GO15318 223 aaPredicted RBP10.82□□□□□ -0.68
VAMP1-206ENST00000538970 KCNAB3O43448 404 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 STAMBPO95630 424 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 HPRP00739 348 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 IGFBP1P08833 259 aaPredicted RBP10.82□□□□□ -0.68
VAMP1-206ENST00000538970 CBLP22681 906 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 GIFP27352 417 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 CDK6Q00534 326 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 IL1RL1Q01638 556 aa10.82□□□□□ -0.68
VAMP1-206ENST00000538970 SNTB2Q13425 540 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms