RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 NANOS3P60323 173 aaKnown RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 SF3A2Q15428 464 aaKnown RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ATAD3CQ5T2N8 411 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 RSBN1Q5VWQ0 802 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 KANSL1Q7Z3B3 1105 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TRIM63Q969Q1 353 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 GRHPRQ9UBQ7 328 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 KLHDC2Q9Y2U9 406 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 HMX3A6NHT5 357 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PSMD9O00233 223 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PRKAR1AP10644 381 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PGCP20142 388 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 CXCR1P25024 350 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ITPKBP27987 946 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TALDO1P37837 337 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 DDOSTP39656 456 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ARRB1P49407 418 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-208ENST00000538333 MZT2BQ6NZ67 158 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TMEM71Q6P5X7 295 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 SHISA6Q6ZSJ9 500 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 STT3BQ8TCJ2 826 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PHYHIPQ92561 330 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 PTDSS2Q9BVG9 487 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 TAS2R5Q9NYW4 299 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF221Q9UK13 617 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 SRPK3Q9UPE1 567 aa12.71□□□□□ -0.37
LIMK1-208ENST00000538333 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.38
LIMK1-208ENST00000538333 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 TNRC6BQ9UPQ9 1833 aaKnown RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 H7C1C5 153 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 PIN1P1O15428 100 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 FLRT2O43155 660 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 LANCL1O43813 399 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 NPIPB7O75200 414 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 EVI2BP34910 448 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 NR4A2P43354 598 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 PITPNBP48739 271 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 LCN6P62502 163 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 QPRTQ15274 297 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 GPR139Q6DWJ6 353 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 PLET1Q6UQ28 207 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 NCCRP1Q6ZVX7 275 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 OVCH1Q7RTY7 1134 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 GLCCI1Q86VQ1 547 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 CDC20BQ86Y33 519 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 FAM210AQ96ND0 272 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 WACQ9BTA9 647 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 NEK6Q9HC98 313 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ATXN7L1Q9ULK2 861 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 LY6G6EA0A0G2JKS1 128 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 A0A1B0GVC2 190 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 A6NIN4 97 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 FZD7O75084 574 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 UPK3AO75631 287 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ZFPL1O95159 310 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ABHD16AO95870 558 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 FOSL2P15408 326 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 PNLIPP16233 465 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 P2RX1P51575 399 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 SQSTM1Q13501 440 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 CBFBQ13951 182 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 SLC6A19Q695T7 634 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 OR4D9Q8NGE8 314 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ABHD1Q96SE0 405 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 MESP1Q9BRJ9 268 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 SEMA4CQ9C0C4 833 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ABRACLQ9P1F3 81 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
LIMK1-208ENST00000538333 ZNF281Q9Y2X9 895 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 U3KQA8 63 aa12.7□□□□□ -0.38
LIMK1-208ENST00000538333 OR6C70A6NIJ9 312 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 SCO2O43819 266 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 NUDT14O95848 222 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 KRT8P05787 483 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 PSKH1P11801 424 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 GP1BBP13224 206 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-208ENST00000538333 CLDN20P56880 219 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 RNF4P78317 190 aa12.69□□□□□ -0.38
LIMK1-208ENST00000538333 HSD17B12Q53GQ0 312 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms