RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PAX7P23759 505 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 KDELR2P33947 212 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 SEC24CP53992 1094 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 SLC25A3Q00325 362 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 C9orf135Q5VTT2 229 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 KLHL17Q6TDP4 642 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 MICU2Q8IYU8 434 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 TMEM123Q8N131 208 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 KBTBD8Q8NFY9 601 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 RNF217Q8TC41 542 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 MAGEE2Q8TD90 523 aaPredicted RBP15.07■□□□□ 0
SFSWAP-205ENST00000537164 TMEM171Q8WVE6 324 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 ELAC2Q9BQ52 826 aaKnown RBP15.07■□□□□ 0
SFSWAP-205ENST00000537164 PRSS27Q9BQR3 290 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 ASPNQ9BXN1 380 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 GRIP2Q9C0E4 1043 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 EFCAB1Q9HAE3 211 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 OBP2BQ9NPH6 170 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 SLC7A7Q9UM01 511 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 SH3GLB1Q9Y371 365 aa15.07■□□□□ 0
SFSWAP-205ENST00000537164 MAGED1Q9Y5V3 778 aaPredicted RBP15.07■□□□□ 0
SFSWAP-205ENST00000537164 PLPP3O14495 311 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 ABCD4O14678 606 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 SNX3O60493 162 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 UPK3AO75631 287 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 IGF2P01344 180 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 HOXB1P14653 301 aaPredicted RBP15.06■□□□□ 0
SFSWAP-205ENST00000537164 CD40P25942 277 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 LSP1P33241 339 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 SH3BGRP55822 239 aaPredicted RBP15.06■□□□□ 0
SFSWAP-205ENST00000537164 LGALS3BPQ08380 585 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 PUDPQ08623 228 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 TTC33Q6PID6 262 aaPredicted RBP15.06■□□□□ 0
SFSWAP-205ENST00000537164 PXKQ7Z7A4 578 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 CARM1Q86X55 608 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 OR1K1Q8NGR3 316 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 NEUROG1Q92886 237 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 LRR1Q96L50 414 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 ALKBH3Q96Q83 286 aaPredicted RBP15.06■□□□□ 0
SFSWAP-205ENST00000537164 OR2M2Q96R28 347 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 CXorf56Q9H5V9 222 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 NOX1Q9Y5S8 564 aa15.06■□□□□ 0
SFSWAP-205ENST00000537164 ARPC4-TTLL3A0A0A6YYG9 625 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 A0A1W2PR80 420 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 LRRN3E7EW58 273 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 AKAP8O43823 692 aaKnown RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 SLC43A1O75387 559 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 KRT33AO76009 404 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 WNT11O96014 354 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 HLA-DOBP13765 273 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 NQO1P15559 274 aaKnown RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 DRD4P21917 467 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 CBLP22681 906 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 PTH2RP49190 550 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 PRPS1P60891 318 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 SELENOWP63302 87 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 ZP4Q12836 540 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 PMS2P3Q13401 168 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 C1DQ13901 141 aaKnown RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 ZNF74Q16587 644 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 PGGHGQ32M88 737 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 CYBRD1Q53TN4 286 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 UEVLDQ8IX04 471 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 PIK3C3Q8NEB9 887 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 OR5J2Q8NH18 312 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 SMAP2Q8WU79 429 aaPredicted RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 BCL2L2Q92843 193 aaPredicted RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 NELFAQ9H3P2 528 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 FKRPQ9H9S5 495 aa15.05■□□□□ -0
SFSWAP-205ENST00000537164 CISD1Q9NZ45 108 aaKnown RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 NSD1Q96L73 2696 aaPredicted RBP15.05■□□□□ -0
SFSWAP-205ENST00000537164 NME4O00746 187 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 NDUFAB1O14561 156 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 OR5F1O95221 314 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 SOD3P08294 240 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 ASAH2BP0C7U1 165 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 THRBP10828 461 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 PRDX6P30041 224 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 RBM34P42696 430 aaKnown RBP15.04■□□□□ -0
SFSWAP-205ENST00000537164 ZNF83P51522 516 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 ROR2Q01974 943 aaKnown RBP15.04■□□□□ -0
SFSWAP-205ENST00000537164 C3orf36Q3SXR2 165 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 TBRG1Q3YBR2 411 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 HIKESHIQ53FT3 197 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 Q5PR19 223 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 ANKRD16Q6P6B7 361 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 DTX2Q86UW9 622 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 CMTM5Q96DZ9 223 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 NSRP1Q9H0G5 558 aaKnown RBP15.04■□□□□ -0
SFSWAP-205ENST00000537164 GPR35Q9HC97 309 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 MEPEQ9NQ76 525 aaPredicted RBP15.04■□□□□ -0
SFSWAP-205ENST00000537164 ABCD2Q9UBJ2 740 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 ZNF229Q9UJW7 825 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 LAMP3Q9UQV4 416 aa15.04■□□□□ -0
SFSWAP-205ENST00000537164 C2CD3Q4AC94 2353 aa15.03■□□□□ -0
SFSWAP-205ENST00000537164 GMNCA6NCL1 334 aa15.03■□□□□ -0
SFSWAP-205ENST00000537164 TNFRSF1BP20333 461 aa15.03■□□□□ -0
SFSWAP-205ENST00000537164 PTNP21246 168 aa15.03■□□□□ -0
SFSWAP-205ENST00000537164 SLC7A2P52569 658 aa15.03■□□□□ -0
SFSWAP-205ENST00000537164 CDH11P55287 796 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms