RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PNPLA2Q96AD5 504 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 RSRP1Q9BUV0 290 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 SLC38A1Q9H2H9 487 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 PRDM7Q9NQW5 492 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 KCND3Q9UK17 655 aa12.83□□□□□ -0.35
LIG1-203ENST00000536218 ACVR1BP36896 505 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 ART1P52961 327 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 CLINT1Q14677 625 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 NFATC4Q14934 902 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 PEA15Q15121 130 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 RNF212Q495C1 297 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 BBS1Q8NFJ9 593 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 OR6K3Q8NGY3 331 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 LCORQ96JN0 433 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 TCEAL2Q9H3H9 227 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 OIP5O43482 229 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 AIFM1O95831 613 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 HNRNPA2B1P22626 353 aaKnown RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 NTSP30990 170 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 Q6ZSR6 202 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 OR4N5Q8IXE1 308 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 C16orf58Q96GQ5 468 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 FNDC11Q9BVV2 318 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
LIG1-203ENST00000536218 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
LIG1-203ENST00000536218 A0A1W2PPE3 182 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 C2CD4DB7Z1M9 353 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SLC25A12O75746 678 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 NQO2P16083 231 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SPI1P17947 270 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 TBXA2RP21731 343 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 MPGP29372 298 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 CCINQ13939 588 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 FAM69AQ5T7M9 428 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 ZNF626Q68DY1 528 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 PLBD1Q6P4A8 553 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 DBX2Q6ZNG2 339 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
LIG1-203ENST00000536218 OR2W3Q7Z3T1 314 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 OR2L5Q8NG80 312 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 GPR32P1Q8NGA4 272 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 GTF3AQ92664 365 aaKnown RBP12.82□□□□□ -0.36
LIG1-203ENST00000536218 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 ZNF860A6NHJ4 632 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 M0R3H8 397 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 MAN2B1O00754 1011 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SNAPC5O75971 98 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 PVRP15151 417 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 CPN1P15169 458 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 DRD1P21728 446 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 STAT5AP42229 794 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SRSF3P84103 164 aaKnown RBP12.82□□□□□ -0.36
LIG1-203ENST00000536218 C1orf61Q13536 156 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 Q6ZS52 159 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 PRICKLE2Q7Z3G6 844 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SLC44A3Q8N4M1 653 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 OR4D11Q8NGI4 311 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 SMIM4Q8WVI0 70 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 C6orf106Q9H6K1 298 aaPredicted RBP12.82□□□□□ -0.36
LIG1-203ENST00000536218 TAS2R5Q9NYW4 299 aa12.82□□□□□ -0.36
LIG1-203ENST00000536218 H2AFY2Q9P0M6 372 aaPredicted RBP12.82□□□□□ -0.36
LIG1-203ENST00000536218 OR14I1A6ND48 311 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 FAM183AA6NL82 134 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 OR2T1O43869 369 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 HMGN2P05204 90 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 UBBP0CG47 229 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 UBCP0CG48 685 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 ZNF14P17017 642 aaPredicted RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 GABRG2P18507 467 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 AKR1C3P42330 323 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 PSMD4P55036 377 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 CASP6P55212 293 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 RPS27AP62979 156 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
LIG1-203ENST00000536218 ZIC1Q15915 447 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 SSX2Q16385 188 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 TMEM35AQ53FP2 167 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 SLC30A6Q6NXT4 461 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 DMBX1Q8NFW5 382 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 OR13C5Q8NGS8 318 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 BBS10Q8TAM1 723 aa12.81□□□□□ -0.36
LIG1-203ENST00000536218 C14orf79Q96F83 325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms