RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 KCNG3Q8TAE7 436 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 BOD1Q96IK1 185 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 WASH6PQ9NQA3 447 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 PRAMEF25A6NGN4 478 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 GABREP78334 506 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 HES1Q14469 280 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 TMPRSS7Q7RTY8 843 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 OR5D18Q8NGL1 313 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 TMEM221A6NGB7 291 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 FURINP09958 794 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 SEMA3BQ13214 749 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC10A1Q14973 349 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 CMPK2Q5EBM0 449 aa16.82■□□□□ 0.28
SFSWAP-203ENST00000535236 BLVRBP30043 206 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CMIPQ8IY22 773 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 NMNAT3Q96T66 252 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 A8MVM7 634 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 GABARAPH6UMI1 98 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF701M0R085 212 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 PRICKLE3O43900 615 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 PRKRAO75569 313 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 GABARAPO95166 117 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A6P0DMU7 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A5P0DMU8 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A7P0DMV0 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A8P0DMV1 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A9P0DMV2 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ARL16Q0P5N6 197 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 GPR19Q15760 415 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A2Q5DJT8 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A1Q5HYN5 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 SCCPDHQ8NBX0 429 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 GOT1L1Q8NHS2 421 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CT45A3Q8NHU0 189 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 C1orf123Q9NWV4 160 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ZNF732B4DXR9 585 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CDK4P11802 303 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 BCKDHBP21953 392 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 EVI2BP34910 448 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 SHEQ5VZ18 495 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 LPCAT3Q6P1A2 487 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 MARCH3Q86UD3 253 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 LINC00346Q8IVM7 164 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 STT3BQ8TCJ2 826 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 THOC3Q96J01 351 aaKnown RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC22A12Q96S37 553 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 P2RY10O00398 339 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 KCNIP4Q6PIL6 250 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 ZFP90Q8TF47 636 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 CPNE4Q96A23 557 aaPredicted RBP16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 SAMD10Q9BYL1 202 aa16.81■□□□□ 0.28
SFSWAP-203ENST00000535236 A0A1B0GWA3 101 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 UBBP0CG47 229 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 UBCP0CG48 685 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 MAKP20794 623 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 C6orf15Q6UXA7 325 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 WDR5BQ86VZ2 330 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TM4SF18Q96CE8 201 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 NIPAL2Q9H841 368 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TUBG2Q9NRH3 451 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 SLAMF8Q9P0V8 285 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 BATFQ16520 125 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 SYT13Q7L8C5 426 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 WWTR1Q9GZV5 400 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 NRIP3Q9NQ35 241 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 FZD7O75084 574 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 ZIC2O95409 532 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TACR1P25103 407 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 HABP2Q14520 560 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TBPL2Q6SJ96 375 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TXN2Q99757 166 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 NT5DC2Q9H857 520 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 K7EPK0 472 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 RGS11O94810 467 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 MYOGP15173 224 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 GABRA5P31644 462 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 RAB11AP62491 216 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 GPLD1P80108 840 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 BCL7AQ4VC05 210 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 ATPAF1Q5TC12 328 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 DPY19L2P2Q6ZN68 376 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 Q6ZTK2 550 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 FAM71E2Q8N5Q1 922 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 TMEM82A0PJX8 343 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 MED6O75586 246 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 IL10RAQ13651 578 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 SLC22A25Q6T423 547 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 PGAP1Q75T13 922 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 L3MBTL4Q8NA19 623 aa16.8■□□□□ 0.28
SFSWAP-203ENST00000535236 DOK2O60496 412 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 TPMTP51580 245 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 BAXQ07812 192 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 C9orf152Q5JTZ5 239 aa16.79■□□□□ 0.28
SFSWAP-203ENST00000535236 OR56B4Q8NH76 319 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms